Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TCRAP04437 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC11.94□□□□□ -0.5
TCRAP04437 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRAP04437 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRAP04437 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC11.94□□□□□ -0.5
TCRAP04437 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC11.94□□□□□ -0.5
TCRAP04437 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TCRAP04437 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC11.93□□□□□ -0.5
TCRAP04437 INTS4P1-203ENST00000641008 3683 ntBASIC11.93□□□□□ -0.5
TCRAP04437 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
TCRAP04437 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TCRAP04437 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC11.93□□□□□ -0.5
TCRAP04437 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TCRAP04437 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC11.93□□□□□ -0.5
TCRAP04437 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TCRAP04437 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TCRAP04437 AC104581.4-201ENST00000623126 3052 ntBASIC11.93□□□□□ -0.5
TCRAP04437 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TCRAP04437 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC11.93□□□□□ -0.5
TCRAP04437 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TCRAP04437 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TCRAP04437 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
TCRAP04437 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC11.93□□□□□ -0.5
TCRAP04437 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TCRAP04437 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TCRAP04437 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
TCRAP04437 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
TCRAP04437 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TCRAP04437 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TCRAP04437 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC11.93□□□□□ -0.5
TCRAP04437 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TCRAP04437 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TCRAP04437 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC11.93□□□□□ -0.5
TCRAP04437 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TCRAP04437 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TCRAP04437 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TCRAP04437 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TCRAP04437 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC11.93□□□□□ -0.5
TCRAP04437 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TCRAP04437 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC11.93□□□□□ -0.5
TCRAP04437 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TCRAP04437 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
TCRAP04437 AC073389.1-201ENST00000595595 795 ntBASIC11.93□□□□□ -0.5
TCRAP04437 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC11.93□□□□□ -0.5
TCRAP04437 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
TCRAP04437 FAM215A-202ENST00000632077 792 ntBASIC11.93□□□□□ -0.5
TCRAP04437 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
TCRAP04437 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
TCRAP04437 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TCRAP04437 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TCRAP04437 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TCRAP04437 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TCRAP04437 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TCRAP04437 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TCRAP04437 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TCRAP04437 RDX-218ENST00000544551 4117 ntTSL 2 BASIC11.93□□□□□ -0.5
TCRAP04437 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TCRAP04437 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TCRAP04437 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TCRAP04437 KRT8P37-201ENST00000451609 1420 ntBASIC11.93□□□□□ -0.5
TCRAP04437 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC11.93□□□□□ -0.5
TCRAP04437 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
TCRAP04437 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TCRAP04437 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC11.93□□□□□ -0.5
TCRAP04437 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
TCRAP04437 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC11.93□□□□□ -0.5
TCRAP04437 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TCRAP04437 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TCRAP04437 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC11.93□□□□□ -0.5
TCRAP04437 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
TCRAP04437 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TCRAP04437 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRAP04437 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC11.92□□□□□ -0.5
TCRAP04437 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TCRAP04437 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC11.92□□□□□ -0.5
TCRAP04437 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRAP04437 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
TCRAP04437 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRAP04437 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRAP04437 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRAP04437 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC11.92□□□□□ -0.5
TCRAP04437 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
TCRAP04437 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRAP04437 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
TCRAP04437 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC11.92□□□□□ -0.5
TCRAP04437 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRAP04437 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC11.92□□□□□ -0.5
TCRAP04437 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRAP04437 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TCRAP04437 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRAP04437 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TCRAP04437 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
TCRAP04437 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRAP04437 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRAP04437 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TCRAP04437 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC11.92□□□□□ -0.5
TCRAP04437 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
TCRAP04437 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRAP04437 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRAP04437 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms