Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOC3P02656 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
APOC3P02656 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
APOC3P02656 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.53□□□□□ -0.4
APOC3P02656 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
APOC3P02656 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
APOC3P02656 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
APOC3P02656 AC103564.2-201ENST00000432853 1299 ntBASIC12.53□□□□□ -0.4
APOC3P02656 AC007967.3-201ENST00000434308 558 ntBASIC12.53□□□□□ -0.4
APOC3P02656 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC12.53□□□□□ -0.4
APOC3P02656 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC12.53□□□□□ -0.4
APOC3P02656 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC12.53□□□□□ -0.4
APOC3P02656 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC12.53□□□□□ -0.4
APOC3P02656 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC12.53□□□□□ -0.4
APOC3P02656 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOC3P02656 SIGLEC29P-201ENST00000599873 1114 ntBASIC12.53□□□□□ -0.4
APOC3P02656 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC12.53□□□□□ -0.4
APOC3P02656 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
APOC3P02656 AC092865.7-201ENST00000641832 219 ntBASIC12.53□□□□□ -0.4
APOC3P02656 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
APOC3P02656 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOC3P02656 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOC3P02656 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOC3P02656 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC12.53□□□□□ -0.4
APOC3P02656 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
APOC3P02656 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.53□□□□□ -0.4
APOC3P02656 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOC3P02656 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
APOC3P02656 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
APOC3P02656 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC12.53□□□□□ -0.4
APOC3P02656 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOC3P02656 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOC3P02656 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOC3P02656 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOC3P02656 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
APOC3P02656 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOC3P02656 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOC3P02656 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOC3P02656 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.53□□□□□ -0.4
APOC3P02656 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
APOC3P02656 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.53□□□□□ -0.4
APOC3P02656 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOC3P02656 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC12.53□□□□□ -0.4
APOC3P02656 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
APOC3P02656 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOC3P02656 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
APOC3P02656 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOC3P02656 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOC3P02656 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOC3P02656 LGALS8-AS1-201ENST00000487567 1457 ntBASIC12.53□□□□□ -0.4
APOC3P02656 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
APOC3P02656 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
APOC3P02656 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
APOC3P02656 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
APOC3P02656 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
APOC3P02656 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
APOC3P02656 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
APOC3P02656 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
APOC3P02656 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
APOC3P02656 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
APOC3P02656 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC12.52□□□□□ -0.4
APOC3P02656 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
APOC3P02656 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
APOC3P02656 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
APOC3P02656 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
APOC3P02656 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
APOC3P02656 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
APOC3P02656 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
APOC3P02656 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOC3P02656 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOC3P02656 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.52□□□□□ -0.41
APOC3P02656 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOC3P02656 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOC3P02656 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APOC3P02656 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC12.52□□□□□ -0.41
APOC3P02656 RNF121-214ENST00000533380 870 ntTSL 3 BASIC12.52□□□□□ -0.41
APOC3P02656 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC12.52□□□□□ -0.41
APOC3P02656 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC12.52□□□□□ -0.41
APOC3P02656 AC020765.3-201ENST00000613051 740 ntBASIC12.52□□□□□ -0.41
APOC3P02656 ABBA01031661.1-201ENST00000634362 1253 ntBASIC12.52□□□□□ -0.41
APOC3P02656 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC12.52□□□□□ -0.41
APOC3P02656 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOC3P02656 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOC3P02656 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
APOC3P02656 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOC3P02656 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOC3P02656 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOC3P02656 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.52□□□□□ -0.41
APOC3P02656 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOC3P02656 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APOC3P02656 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOC3P02656 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
APOC3P02656 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
APOC3P02656 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APOC3P02656 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
APOC3P02656 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
APOC3P02656 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
APOC3P02656 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC12.52□□□□□ -0.41
APOC3P02656 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
APOC3P02656 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms