Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.03■□□□□ 0.16
MT-CO1P00395 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
MT-CO1P00395 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
MT-CO1P00395 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.03■□□□□ 0.16
MT-CO1P00395 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MT-CO1P00395 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.03■□□□□ 0.16
MT-CO1P00395 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.03■□□□□ 0.16
MT-CO1P00395 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MT-CO1P00395 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MT-CO1P00395 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.03■□□□□ 0.16
MT-CO1P00395 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MT-CO1P00395 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.03■□□□□ 0.16
MT-CO1P00395 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
MT-CO1P00395 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.03■□□□□ 0.16
MT-CO1P00395 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.03■□□□□ 0.16
MT-CO1P00395 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.03■□□□□ 0.16
MT-CO1P00395 MYCLP2-201ENST00000449268 967 ntBASIC16.03■□□□□ 0.16
MT-CO1P00395 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MT-CO1P00395 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.03■□□□□ 0.16
MT-CO1P00395 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.03■□□□□ 0.16
MT-CO1P00395 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.03■□□□□ 0.16
MT-CO1P00395 AC123567.1-201ENST00000548294 1261 ntBASIC16.03■□□□□ 0.16
MT-CO1P00395 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.03■□□□□ 0.16
MT-CO1P00395 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.03■□□□□ 0.16
MT-CO1P00395 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.03■□□□□ 0.16
MT-CO1P00395 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.03■□□□□ 0.16
MT-CO1P00395 AC099568.2-201ENST00000609194 695 ntBASIC16.03■□□□□ 0.16
MT-CO1P00395 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.03■□□□□ 0.16
MT-CO1P00395 AC012645.4-201ENST00000610691 1061 ntBASIC16.03■□□□□ 0.16
MT-CO1P00395 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.03■□□□□ 0.16
MT-CO1P00395 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
MT-CO1P00395 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.03■□□□□ 0.16
MT-CO1P00395 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.03■□□□□ 0.16
MT-CO1P00395 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.03■□□□□ 0.16
MT-CO1P00395 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.03■□□□□ 0.16
MT-CO1P00395 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
MT-CO1P00395 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.03■□□□□ 0.16
MT-CO1P00395 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MT-CO1P00395 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.03■□□□□ 0.16
MT-CO1P00395 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
MT-CO1P00395 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MT-CO1P00395 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.02■□□□□ 0.16
MT-CO1P00395 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
MT-CO1P00395 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MT-CO1P00395 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
MT-CO1P00395 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
MT-CO1P00395 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
MT-CO1P00395 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
MT-CO1P00395 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MT-CO1P00395 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MT-CO1P00395 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
MT-CO1P00395 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MT-CO1P00395 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
MT-CO1P00395 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
MT-CO1P00395 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
MT-CO1P00395 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
MT-CO1P00395 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
MT-CO1P00395 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MT-CO1P00395 RN7SL399P-201ENST00000471648 279 ntBASIC16.02■□□□□ 0.16
MT-CO1P00395 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
MT-CO1P00395 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
MT-CO1P00395 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.02■□□□□ 0.16
MT-CO1P00395 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.02■□□□□ 0.16
MT-CO1P00395 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.02■□□□□ 0.16
MT-CO1P00395 CTBP2P3-201ENST00000585629 1255 ntBASIC16.02■□□□□ 0.16
MT-CO1P00395 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.02■□□□□ 0.16
MT-CO1P00395 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.02■□□□□ 0.16
MT-CO1P00395 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
MT-CO1P00395 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.02■□□□□ 0.16
MT-CO1P00395 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MT-CO1P00395 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
MT-CO1P00395 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
MT-CO1P00395 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
MT-CO1P00395 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
MT-CO1P00395 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
MT-CO1P00395 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
MT-CO1P00395 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
MT-CO1P00395 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
MT-CO1P00395 AC023824.1-201ENST00000562945 2975 ntBASIC16.02■□□□□ 0.15
MT-CO1P00395 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
MT-CO1P00395 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
MT-CO1P00395 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.02■□□□□ 0.15
MT-CO1P00395 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
MT-CO1P00395 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MT-CO1P00395 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MT-CO1P00395 AC073347.1-201ENST00000421633 2643 ntBASIC16.01■□□□□ 0.15
MT-CO1P00395 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
MT-CO1P00395 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
MT-CO1P00395 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MT-CO1P00395 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.01■□□□□ 0.15
MT-CO1P00395 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MT-CO1P00395 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.01■□□□□ 0.15
MT-CO1P00395 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.01■□□□□ 0.15
MT-CO1P00395 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MT-CO1P00395 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
MT-CO1P00395 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.01■□□□□ 0.15
MT-CO1P00395 ELK1P1-201ENST00000485699 580 ntBASIC16.01■□□□□ 0.15
MT-CO1P00395 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.01■□□□□ 0.15
MT-CO1P00395 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.01■□□□□ 0.15
MT-CO1P00395 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms