Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PFDN1O60925 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
PFDN1O60925 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
PFDN1O60925 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PFDN1O60925 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PFDN1O60925 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.92□□□□□ -0.18
PFDN1O60925 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.92□□□□□ -0.18
PFDN1O60925 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC13.92□□□□□ -0.18
PFDN1O60925 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.92□□□□□ -0.18
PFDN1O60925 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.92□□□□□ -0.18
PFDN1O60925 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PFDN1O60925 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
PFDN1O60925 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PFDN1O60925 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PFDN1O60925 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
PFDN1O60925 KRT18P5-201ENST00000436075 1291 ntBASIC13.92□□□□□ -0.18
PFDN1O60925 AC097658.1-201ENST00000475555 843 ntBASIC13.92□□□□□ -0.18
PFDN1O60925 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC13.92□□□□□ -0.18
PFDN1O60925 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC13.92□□□□□ -0.18
PFDN1O60925 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC13.92□□□□□ -0.18
PFDN1O60925 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PFDN1O60925 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
PFDN1O60925 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PFDN1O60925 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PFDN1O60925 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
PFDN1O60925 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PFDN1O60925 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
PFDN1O60925 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PFDN1O60925 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PFDN1O60925 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PFDN1O60925 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
PFDN1O60925 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PFDN1O60925 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PFDN1O60925 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
PFDN1O60925 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.92□□□□□ -0.18
PFDN1O60925 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
PFDN1O60925 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
PFDN1O60925 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
PFDN1O60925 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PFDN1O60925 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
PFDN1O60925 AL135999.2-201ENST00000622438 1686 ntBASIC13.91□□□□□ -0.18
PFDN1O60925 DPYSL5-207ENST00000614712 5128 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
PFDN1O60925 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PFDN1O60925 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PFDN1O60925 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC13.91□□□□□ -0.18
PFDN1O60925 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.91□□□□□ -0.18
PFDN1O60925 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PFDN1O60925 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC13.91□□□□□ -0.18
PFDN1O60925 AC015802.1-201ENST00000588104 1449 ntBASIC13.91□□□□□ -0.18
PFDN1O60925 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC13.91□□□□□ -0.18
PFDN1O60925 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PFDN1O60925 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC13.91□□□□□ -0.18
PFDN1O60925 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
PFDN1O60925 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
PFDN1O60925 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PFDN1O60925 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PFDN1O60925 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PFDN1O60925 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PFDN1O60925 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PFDN1O60925 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PFDN1O60925 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
PFDN1O60925 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PFDN1O60925 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
PFDN1O60925 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
PFDN1O60925 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PFDN1O60925 MIR638-201ENST00000385237 100 ntBASIC13.91□□□□□ -0.18
PFDN1O60925 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PFDN1O60925 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC13.91□□□□□ -0.18
PFDN1O60925 RHEB-204ENST00000472642 900 ntTSL 3 BASIC13.91□□□□□ -0.18
PFDN1O60925 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
PFDN1O60925 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PFDN1O60925 AC026271.3-201ENST00000571884 352 ntBASIC13.91□□□□□ -0.18
PFDN1O60925 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC13.91□□□□□ -0.18
PFDN1O60925 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC13.91□□□□□ -0.18
PFDN1O60925 AC112497.1-201ENST00000624824 639 ntBASIC13.91□□□□□ -0.18
PFDN1O60925 ABBA01031674.1-201ENST00000635145 728 ntBASIC13.91□□□□□ -0.18
PFDN1O60925 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
PFDN1O60925 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PFDN1O60925 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PFDN1O60925 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC13.91□□□□□ -0.18
PFDN1O60925 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.91□□□□□ -0.18
PFDN1O60925 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
PFDN1O60925 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.91□□□□□ -0.18
PFDN1O60925 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PFDN1O60925 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PFDN1O60925 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.91□□□□□ -0.18
PFDN1O60925 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PFDN1O60925 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
PFDN1O60925 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.91□□□□□ -0.18
PFDN1O60925 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PFDN1O60925 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC13.91□□□□□ -0.18
PFDN1O60925 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.91□□□□□ -0.18
PFDN1O60925 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PFDN1O60925 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PFDN1O60925 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PFDN1O60925 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PFDN1O60925 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
PFDN1O60925 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PFDN1O60925 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PFDN1O60925 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms