Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LCMT2O60294 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LCMT2O60294 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
LCMT2O60294 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.94□□□□□ -0.02
LCMT2O60294 AC022532.1-201ENST00000624563 1728 ntBASIC14.94□□□□□ -0.02
LCMT2O60294 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.94□□□□□ -0.02
LCMT2O60294 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.94□□□□□ -0.02
LCMT2O60294 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
LCMT2O60294 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LCMT2O60294 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LCMT2O60294 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
LCMT2O60294 C18orf15-201ENST00000623680 2534 ntBASIC14.94□□□□□ -0.02
LCMT2O60294 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LCMT2O60294 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
LCMT2O60294 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LCMT2O60294 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.94□□□□□ -0.02
LCMT2O60294 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LCMT2O60294 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LCMT2O60294 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
LCMT2O60294 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LCMT2O60294 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LCMT2O60294 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LCMT2O60294 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.93□□□□□ -0.02
LCMT2O60294 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LCMT2O60294 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.93□□□□□ -0.02
LCMT2O60294 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LCMT2O60294 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.93□□□□□ -0.02
LCMT2O60294 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LCMT2O60294 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LCMT2O60294 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
LCMT2O60294 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LCMT2O60294 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LCMT2O60294 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LCMT2O60294 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LCMT2O60294 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.93□□□□□ -0.02
LCMT2O60294 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LCMT2O60294 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LCMT2O60294 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.93□□□□□ -0.02
LCMT2O60294 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LCMT2O60294 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.93□□□□□ -0.02
LCMT2O60294 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.93□□□□□ -0.02
LCMT2O60294 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.93□□□□□ -0.02
LCMT2O60294 RN7SL399P-201ENST00000471648 279 ntBASIC14.93□□□□□ -0.02
LCMT2O60294 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.93□□□□□ -0.02
LCMT2O60294 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.93□□□□□ -0.02
LCMT2O60294 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.93□□□□□ -0.02
LCMT2O60294 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.93□□□□□ -0.02
LCMT2O60294 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.93□□□□□ -0.02
LCMT2O60294 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.93□□□□□ -0.02
LCMT2O60294 AL132655.2-201ENST00000596276 594 ntBASIC14.93□□□□□ -0.02
LCMT2O60294 CHCHD2P3-201ENST00000603038 451 ntBASIC14.93□□□□□ -0.02
LCMT2O60294 AC000095.1-201ENST00000603208 874 ntBASIC14.93□□□□□ -0.02
LCMT2O60294 SLC7A15P-201ENST00000424028 1363 ntBASIC14.93□□□□□ -0.02
LCMT2O60294 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LCMT2O60294 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.93□□□□□ -0.02
LCMT2O60294 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
LCMT2O60294 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LCMT2O60294 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.93□□□□□ -0.02
LCMT2O60294 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LCMT2O60294 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LCMT2O60294 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LCMT2O60294 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LCMT2O60294 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LCMT2O60294 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LCMT2O60294 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LCMT2O60294 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.93□□□□□ -0.02
LCMT2O60294 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LCMT2O60294 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.93□□□□□ -0.02
LCMT2O60294 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LCMT2O60294 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LCMT2O60294 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LCMT2O60294 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
LCMT2O60294 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LCMT2O60294 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LCMT2O60294 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LCMT2O60294 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LCMT2O60294 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LCMT2O60294 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.92□□□□□ -0.02
LCMT2O60294 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LCMT2O60294 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LCMT2O60294 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LCMT2O60294 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LCMT2O60294 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LCMT2O60294 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LCMT2O60294 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LCMT2O60294 AC093004.1-201ENST00000508850 424 ntBASIC14.92□□□□□ -0.02
LCMT2O60294 API5-211ENST00000534695 560 ntTSL 5 BASIC14.92□□□□□ -0.02
LCMT2O60294 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.92□□□□□ -0.02
LCMT2O60294 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LCMT2O60294 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.92□□□□□ -0.02
LCMT2O60294 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.92□□□□□ -0.02
LCMT2O60294 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LCMT2O60294 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LCMT2O60294 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
LCMT2O60294 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LCMT2O60294 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.92□□□□□ -0.02
LCMT2O60294 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.92□□□□□ -0.02
LCMT2O60294 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LCMT2O60294 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LCMT2O60294 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms