Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 AC104989.1-201ENST00000519711 778 ntBASIC15.13■□□□□ 0.01
SLC28A2O43868 SNX29P1-201ENST00000548357 1007 ntBASIC15.13■□□□□ 0.01
SLC28A2O43868 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC28A2O43868 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SLC28A2O43868 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.13■□□□□ 0.01
SLC28A2O43868 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC28A2O43868 MIR6869-201ENST00000619434 62 ntBASIC15.13■□□□□ 0.01
SLC28A2O43868 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.13■□□□□ 0.01
SLC28A2O43868 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC28A2O43868 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.13■□□□□ 0.01
SLC28A2O43868 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.13■□□□□ 0.01
SLC28A2O43868 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SLC28A2O43868 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC28A2O43868 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC28A2O43868 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
SLC28A2O43868 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.13■□□□□ 0.01
SLC28A2O43868 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC28A2O43868 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC28A2O43868 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC28A2O43868 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC28A2O43868 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.12■□□□□ 0.01
SLC28A2O43868 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.12■□□□□ 0.01
SLC28A2O43868 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC28A2O43868 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC28A2O43868 AC020907.1-201ENST00000616460 1350 ntBASIC15.12■□□□□ 0.01
SLC28A2O43868 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
SLC28A2O43868 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC28A2O43868 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
SLC28A2O43868 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC28A2O43868 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SLC28A2O43868 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC28A2O43868 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SLC28A2O43868 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SLC28A2O43868 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.12■□□□□ 0.01
SLC28A2O43868 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC28A2O43868 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
SLC28A2O43868 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC28A2O43868 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC28A2O43868 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC28A2O43868 TMEM14DP-201ENST00000422205 345 ntBASIC15.12■□□□□ 0.01
SLC28A2O43868 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.12■□□□□ 0.01
SLC28A2O43868 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC28A2O43868 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.12■□□□□ 0.01
SLC28A2O43868 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC28A2O43868 PRYP6-201ENST00000514804 343 ntBASIC15.12■□□□□ 0.01
SLC28A2O43868 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
SLC28A2O43868 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC28A2O43868 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC28A2O43868 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC28A2O43868 AL138918.1-201ENST00000568306 659 ntBASIC15.12■□□□□ 0.01
SLC28A2O43868 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC28A2O43868 AC244093.1-201ENST00000610837 814 ntBASIC15.12■□□□□ 0.01
SLC28A2O43868 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC28A2O43868 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC28A2O43868 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
SLC28A2O43868 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC28A2O43868 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC28A2O43868 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
SLC28A2O43868 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC28A2O43868 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC28A2O43868 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC28A2O43868 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC28A2O43868 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC28A2O43868 AL589702.1-201ENST00000641229 1509 ntBASIC15.12■□□□□ 0.01
SLC28A2O43868 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SLC28A2O43868 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC28A2O43868 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC28A2O43868 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC28A2O43868 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC28A2O43868 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC28A2O43868 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC28A2O43868 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC28A2O43868 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC28A2O43868 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SLC28A2O43868 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SLC28A2O43868 BOLA2P3-201ENST00000404566 256 ntBASIC15.11■□□□□ 0.01
SLC28A2O43868 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC28A2O43868 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.11■□□□□ 0.01
SLC28A2O43868 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC28A2O43868 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.11■□□□□ 0.01
SLC28A2O43868 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC28A2O43868 AC245100.5-201ENST00000452108 331 ntBASIC15.11■□□□□ 0.01
SLC28A2O43868 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC28A2O43868 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC28A2O43868 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.11■□□□□ 0.01
SLC28A2O43868 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.11■□□□□ 0.01
SLC28A2O43868 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC28A2O43868 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15.11■□□□□ 0.01
SLC28A2O43868 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SLC28A2O43868 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC28A2O43868 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
SLC28A2O43868 BTBD7P1-201ENST00000447253 1453 ntBASIC15.11■□□□□ 0.01
SLC28A2O43868 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC28A2O43868 AC092384.3-202ENST00000564646 2873 ntBASIC15.11■□□□□ 0.01
SLC28A2O43868 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SLC28A2O43868 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC28A2O43868 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SLC28A2O43868 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC28A2O43868 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC28A2O43868 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms