Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
O00370 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
O00370 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
O00370 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.66■□□□□ 0.26
O00370 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
O00370 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
O00370 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
O00370 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.66■□□□□ 0.26
O00370 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
O00370 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
O00370 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
O00370 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
O00370 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
O00370 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
O00370 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
O00370 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
O00370 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.66■□□□□ 0.26
O00370 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
O00370 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
O00370 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
O00370 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.66■□□□□ 0.26
O00370 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.66■□□□□ 0.26
O00370 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.66■□□□□ 0.26
O00370 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.66■□□□□ 0.26
O00370 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.66■□□□□ 0.26
O00370 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.66■□□□□ 0.26
O00370 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.66■□□□□ 0.26
O00370 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
O00370 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
O00370 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.66■□□□□ 0.26
O00370 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
O00370 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
O00370 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
O00370 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.66■□□□□ 0.26
O00370 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
O00370 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
O00370 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
O00370 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
O00370 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
O00370 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.66■□□□□ 0.26
O00370 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
O00370 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
O00370 AC091951.1-201ENST00000512854 2465 ntBASIC16.65■□□□□ 0.26
O00370 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
O00370 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
O00370 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.65■□□□□ 0.26
O00370 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.65■□□□□ 0.26
O00370 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
O00370 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
O00370 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
O00370 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
O00370 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
O00370 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
O00370 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.65■□□□□ 0.26
O00370 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
O00370 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.65■□□□□ 0.26
O00370 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.65■□□□□ 0.26
O00370 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.65■□□□□ 0.26
O00370 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.65■□□□□ 0.26
O00370 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
O00370 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
O00370 TIMM17BP1-201ENST00000545713 516 ntBASIC16.65■□□□□ 0.26
O00370 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
O00370 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.65■□□□□ 0.26
O00370 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.65■□□□□ 0.26
O00370 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
O00370 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
O00370 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.65■□□□□ 0.26
O00370 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
O00370 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
O00370 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
O00370 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.65■□□□□ 0.26
O00370 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
O00370 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
O00370 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
O00370 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.65■□□□□ 0.26
O00370 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.65■□□□□ 0.26
O00370 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
O00370 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.65■□□□□ 0.26
O00370 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
O00370 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.65■□□□□ 0.26
O00370 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.65■□□□□ 0.26
O00370 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
O00370 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.64■□□□□ 0.26
O00370 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
O00370 AL109954.1-202ENST00000564051 2148 ntBASIC16.64■□□□□ 0.25
O00370 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.64■□□□□ 0.25
O00370 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
O00370 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
O00370 AC112693.3-201ENST00000624819 1983 ntBASIC16.64■□□□□ 0.25
O00370 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
O00370 AC006486.2-201ENST00000624246 2199 ntBASIC16.64■□□□□ 0.25
O00370 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.64■□□□□ 0.25
O00370 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
O00370 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.64■□□□□ 0.25
O00370 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
O00370 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
O00370 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
O00370 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
O00370 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms