Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 AC112492.5-201ENST00000421897 457 ntBASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 AC234783.1-201ENST00000441761 496 ntBASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 AP005482.1-201ENST00000563722 1273 ntBASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 AC004790.1-201ENST00000612686 536 ntBASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 AL596087.1-201ENST00000400979 1969 ntBASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 GGT4P-201ENST00000623672 1708 ntBASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 MIR658-201ENST00000385210 100 ntBASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 AC079776.1-201ENST00000401540 1152 ntBASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 MIR1909-201ENST00000411312 80 ntBASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 AC025048.3-201ENST00000590609 569 ntBASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 AC005702.4-201ENST00000618393 416 ntBASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 AL033527.5-201ENST00000641382 801 ntBASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.39■□□□□ 0.05
TMX2-CTNND1H3BSU7 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.38■□□□□ 0.05
TMX2-CTNND1H3BSU7 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TMX2-CTNND1H3BSU7 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TMX2-CTNND1H3BSU7 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TMX2-CTNND1H3BSU7 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TMX2-CTNND1H3BSU7 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.38■□□□□ 0.05
TMX2-CTNND1H3BSU7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.38■□□□□ 0.05
TMX2-CTNND1H3BSU7 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.38■□□□□ 0.05
TMX2-CTNND1H3BSU7 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
TMX2-CTNND1H3BSU7 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms