Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM235A6NFC5 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 AC004987.2-201ENST00000395959 1148 ntBASIC13.4□□□□□ -0.26
TMEM235A6NFC5 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 UNC93B6-202ENST00000528242 690 ntBASIC13.4□□□□□ -0.26
TMEM235A6NFC5 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 AC024267.1-201ENST00000582320 895 ntBASIC13.4□□□□□ -0.26
TMEM235A6NFC5 AL450472.2-201ENST00000603663 1156 ntBASIC13.4□□□□□ -0.26
TMEM235A6NFC5 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.4□□□□□ -0.26
TMEM235A6NFC5 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.4□□□□□ -0.27
TMEM235A6NFC5 LINC01230-201ENST00000625222 3017 ntBASIC13.39□□□□□ -0.27
TMEM235A6NFC5 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 AC005840.4-201ENST00000541242 2494 ntBASIC13.39□□□□□ -0.27
TMEM235A6NFC5 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 AC098831.1-202ENST00000438821 336 ntBASIC13.39□□□□□ -0.27
TMEM235A6NFC5 AC009947.1-201ENST00000444350 727 ntBASIC13.39□□□□□ -0.27
TMEM235A6NFC5 AC098859.1-201ENST00000502915 1238 ntBASIC13.39□□□□□ -0.27
TMEM235A6NFC5 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 AL121912.1-201ENST00000603683 238 ntBASIC13.39□□□□□ -0.27
TMEM235A6NFC5 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms