Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SBNO1A3KN83 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SBNO1A3KN83 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC20.8■□□□□ 0.92
SBNO1A3KN83 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC20.8■□□□□ 0.92
SBNO1A3KN83 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SBNO1A3KN83 AC012618.1-201ENST00000461223 412 ntBASIC20.8■□□□□ 0.92
SBNO1A3KN83 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC20.8■□□□□ 0.92
SBNO1A3KN83 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SBNO1A3KN83 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SBNO1A3KN83 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC20.8■□□□□ 0.92
SBNO1A3KN83 AC005324.6-201ENST00000587972 613 ntBASIC20.8■□□□□ 0.92
SBNO1A3KN83 AC068587.8-201ENST00000641239 219 ntBASIC20.8■□□□□ 0.92
SBNO1A3KN83 AC004923.1-202ENST00000642106 209 ntBASIC20.8■□□□□ 0.92
SBNO1A3KN83 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SBNO1A3KN83 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SBNO1A3KN83 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SBNO1A3KN83 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC20.8■□□□□ 0.92
SBNO1A3KN83 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SBNO1A3KN83 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SBNO1A3KN83 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SBNO1A3KN83 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC20.8■□□□□ 0.92
SBNO1A3KN83 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
SBNO1A3KN83 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SBNO1A3KN83 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SBNO1A3KN83 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SBNO1A3KN83 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SBNO1A3KN83 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SBNO1A3KN83 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SBNO1A3KN83 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC20.79■□□□□ 0.92
SBNO1A3KN83 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SBNO1A3KN83 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC20.79■□□□□ 0.92
SBNO1A3KN83 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC20.79■□□□□ 0.92
SBNO1A3KN83 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC20.79■□□□□ 0.92
SBNO1A3KN83 AC103988.2-201ENST00000561804 725 ntBASIC20.79■□□□□ 0.92
SBNO1A3KN83 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SBNO1A3KN83 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SBNO1A3KN83 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.79■□□□□ 0.92
SBNO1A3KN83 AC112504.1-201ENST00000623415 1841 ntBASIC20.79■□□□□ 0.92
SBNO1A3KN83 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
SBNO1A3KN83 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SBNO1A3KN83 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SBNO1A3KN83 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC20.79■□□□□ 0.92
SBNO1A3KN83 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC20.79■□□□□ 0.92
SBNO1A3KN83 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SBNO1A3KN83 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
SBNO1A3KN83 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC20.78■□□□□ 0.92
SBNO1A3KN83 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SBNO1A3KN83 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SBNO1A3KN83 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SBNO1A3KN83 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC20.78■□□□□ 0.92
SBNO1A3KN83 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SBNO1A3KN83 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
SBNO1A3KN83 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SBNO1A3KN83 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC20.78■□□□□ 0.92
SBNO1A3KN83 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SBNO1A3KN83 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SBNO1A3KN83 CLUHP2-201ENST00000426660 1303 ntBASIC20.78■□□□□ 0.92
SBNO1A3KN83 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SBNO1A3KN83 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SBNO1A3KN83 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SBNO1A3KN83 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SBNO1A3KN83 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC20.78■□□□□ 0.92
SBNO1A3KN83 RNMTL1P1-201ENST00000454103 560 ntBASIC20.78■□□□□ 0.92
SBNO1A3KN83 TUBB8P8-201ENST00000458717 1058 ntBASIC20.78■□□□□ 0.92
SBNO1A3KN83 AC021723.1-201ENST00000486306 515 ntBASIC20.78■□□□□ 0.92
SBNO1A3KN83 MESTP3-201ENST00000503460 968 ntBASIC20.78■□□□□ 0.92
SBNO1A3KN83 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SBNO1A3KN83 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC20.78■□□□□ 0.92
SBNO1A3KN83 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC20.78■□□□□ 0.92
SBNO1A3KN83 CENPX-208ENST00000584347 799 ntTSL 2 BASIC20.78■□□□□ 0.92
SBNO1A3KN83 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SBNO1A3KN83 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SBNO1A3KN83 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SBNO1A3KN83 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC20.78■□□□□ 0.92
SBNO1A3KN83 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SBNO1A3KN83 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC20.78■□□□□ 0.92
SBNO1A3KN83 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SBNO1A3KN83 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SBNO1A3KN83 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SBNO1A3KN83 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SBNO1A3KN83 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.77■□□□□ 0.92
SBNO1A3KN83 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC20.77■□□□□ 0.92
SBNO1A3KN83 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SBNO1A3KN83 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SBNO1A3KN83 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SBNO1A3KN83 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SBNO1A3KN83 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SBNO1A3KN83 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
SBNO1A3KN83 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC20.77■□□□□ 0.92
SBNO1A3KN83 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC20.77■□□□□ 0.92
SBNO1A3KN83 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC20.77■□□□□ 0.92
SBNO1A3KN83 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC20.77■□□□□ 0.92
SBNO1A3KN83 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC20.77■□□□□ 0.92
SBNO1A3KN83 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SBNO1A3KN83 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC20.77■□□□□ 0.92
SBNO1A3KN83 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SBNO1A3KN83 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC20.77■□□□□ 0.92
SBNO1A3KN83 AL162426.1-201ENST00000624141 743 ntBASIC20.77■□□□□ 0.92
SBNO1A3KN83 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC20.77■□□□□ 0.92
SBNO1A3KN83 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms