Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX49Q9Y6V7 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX49Q9Y6V7 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX49Q9Y6V7 AC015922.1-201ENST00000421102 1152 ntBASIC18.87■□□□□ 0.61
DDX49Q9Y6V7 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.87■□□□□ 0.61
DDX49Q9Y6V7 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC18.87■□□□□ 0.61
DDX49Q9Y6V7 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.87■□□□□ 0.61
DDX49Q9Y6V7 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DDX49Q9Y6V7 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC18.87■□□□□ 0.61
DDX49Q9Y6V7 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DDX49Q9Y6V7 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
DDX49Q9Y6V7 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.87■□□□□ 0.61
DDX49Q9Y6V7 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.87■□□□□ 0.61
DDX49Q9Y6V7 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DDX49Q9Y6V7 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
DDX49Q9Y6V7 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
DDX49Q9Y6V7 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.87■□□□□ 0.61
DDX49Q9Y6V7 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
DDX49Q9Y6V7 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
DDX49Q9Y6V7 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.87■□□□□ 0.61
DDX49Q9Y6V7 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX49Q9Y6V7 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
DDX49Q9Y6V7 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX49Q9Y6V7 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
DDX49Q9Y6V7 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DDX49Q9Y6V7 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC18.86■□□□□ 0.61
DDX49Q9Y6V7 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX49Q9Y6V7 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX49Q9Y6V7 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX49Q9Y6V7 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX49Q9Y6V7 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
DDX49Q9Y6V7 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX49Q9Y6V7 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.86■□□□□ 0.61
DDX49Q9Y6V7 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
DDX49Q9Y6V7 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
DDX49Q9Y6V7 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX49Q9Y6V7 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.86■□□□□ 0.61
DDX49Q9Y6V7 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
DDX49Q9Y6V7 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DDX49Q9Y6V7 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX49Q9Y6V7 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DDX49Q9Y6V7 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.86■□□□□ 0.61
DDX49Q9Y6V7 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC18.86■□□□□ 0.61
DDX49Q9Y6V7 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX49Q9Y6V7 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DDX49Q9Y6V7 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX49Q9Y6V7 MRPS18AP1-201ENST00000414458 589 ntBASIC18.86■□□□□ 0.61
DDX49Q9Y6V7 SPDYE7P-202ENST00000420373 878 ntBASIC18.86■□□□□ 0.61
DDX49Q9Y6V7 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.86■□□□□ 0.61
DDX49Q9Y6V7 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.86■□□□□ 0.61
DDX49Q9Y6V7 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.86■□□□□ 0.61
DDX49Q9Y6V7 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.86■□□□□ 0.61
DDX49Q9Y6V7 AC069120.2-201ENST00000524091 540 ntBASIC18.86■□□□□ 0.61
DDX49Q9Y6V7 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.86■□□□□ 0.61
DDX49Q9Y6V7 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.86■□□□□ 0.61
DDX49Q9Y6V7 RARRES2P9-201ENST00000565168 469 ntBASIC18.86■□□□□ 0.61
DDX49Q9Y6V7 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.86■□□□□ 0.61
DDX49Q9Y6V7 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX49Q9Y6V7 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
DDX49Q9Y6V7 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
DDX49Q9Y6V7 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX49Q9Y6V7 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX49Q9Y6V7 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.86■□□□□ 0.61
DDX49Q9Y6V7 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
DDX49Q9Y6V7 POR-201ENST00000394893 2532 ntTSL 5 BASIC18.85■□□□□ 0.61
DDX49Q9Y6V7 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC18.85■□□□□ 0.61
DDX49Q9Y6V7 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC18.85■□□□□ 0.61
DDX49Q9Y6V7 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX49Q9Y6V7 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
DDX49Q9Y6V7 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX49Q9Y6V7 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.85■□□□□ 0.61
DDX49Q9Y6V7 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX49Q9Y6V7 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX49Q9Y6V7 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
DDX49Q9Y6V7 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DDX49Q9Y6V7 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DDX49Q9Y6V7 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DDX49Q9Y6V7 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX49Q9Y6V7 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
DDX49Q9Y6V7 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
DDX49Q9Y6V7 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX49Q9Y6V7 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DDX49Q9Y6V7 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
DDX49Q9Y6V7 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX49Q9Y6V7 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
DDX49Q9Y6V7 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX49Q9Y6V7 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX49Q9Y6V7 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX49Q9Y6V7 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.85■□□□□ 0.61
DDX49Q9Y6V7 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.85■□□□□ 0.61
DDX49Q9Y6V7 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX49Q9Y6V7 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.85■□□□□ 0.61
DDX49Q9Y6V7 LINC02560-201ENST00000596379 459 ntBASIC18.85■□□□□ 0.61
DDX49Q9Y6V7 AC003101.2-201ENST00000612557 442 ntBASIC18.85■□□□□ 0.61
DDX49Q9Y6V7 SPDYE12P-201ENST00000618416 771 ntBASIC18.85■□□□□ 0.61
DDX49Q9Y6V7 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX49Q9Y6V7 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.85■□□□□ 0.61
DDX49Q9Y6V7 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC18.85■□□□□ 0.61
DDX49Q9Y6V7 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.85■□□□□ 0.61
DDX49Q9Y6V7 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms