Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
YIPF1Q9Y548 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.19■□□□□ 0.18
YIPF1Q9Y548 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
YIPF1Q9Y548 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.19■□□□□ 0.18
YIPF1Q9Y548 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
YIPF1Q9Y548 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
YIPF1Q9Y548 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
YIPF1Q9Y548 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
YIPF1Q9Y548 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.19■□□□□ 0.18
YIPF1Q9Y548 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
YIPF1Q9Y548 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
YIPF1Q9Y548 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
YIPF1Q9Y548 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
YIPF1Q9Y548 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.19■□□□□ 0.18
YIPF1Q9Y548 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.19■□□□□ 0.18
YIPF1Q9Y548 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
YIPF1Q9Y548 AC114812.1-204ENST00000449669 728 ntBASIC16.19■□□□□ 0.18
YIPF1Q9Y548 AC108725.1-201ENST00000495472 409 ntBASIC16.19■□□□□ 0.18
YIPF1Q9Y548 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.19■□□□□ 0.18
YIPF1Q9Y548 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.19■□□□□ 0.18
YIPF1Q9Y548 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
YIPF1Q9Y548 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.19■□□□□ 0.18
YIPF1Q9Y548 RN7SL560P-201ENST00000577943 264 ntBASIC16.19■□□□□ 0.18
YIPF1Q9Y548 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
YIPF1Q9Y548 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.19■□□□□ 0.18
YIPF1Q9Y548 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16.19■□□□□ 0.18
YIPF1Q9Y548 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.19■□□□□ 0.18
YIPF1Q9Y548 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
YIPF1Q9Y548 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.19■□□□□ 0.18
YIPF1Q9Y548 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
YIPF1Q9Y548 AC092127.1-201ENST00000567093 3455 ntBASIC16.19■□□□□ 0.18
YIPF1Q9Y548 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
YIPF1Q9Y548 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
YIPF1Q9Y548 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
YIPF1Q9Y548 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.19■□□□□ 0.18
YIPF1Q9Y548 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
YIPF1Q9Y548 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
YIPF1Q9Y548 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
YIPF1Q9Y548 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.19■□□□□ 0.18
YIPF1Q9Y548 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
YIPF1Q9Y548 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
YIPF1Q9Y548 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
YIPF1Q9Y548 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
YIPF1Q9Y548 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.19■□□□□ 0.18
YIPF1Q9Y548 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.19■□□□□ 0.18
YIPF1Q9Y548 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
YIPF1Q9Y548 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
YIPF1Q9Y548 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
YIPF1Q9Y548 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
YIPF1Q9Y548 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
YIPF1Q9Y548 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
YIPF1Q9Y548 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
YIPF1Q9Y548 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
YIPF1Q9Y548 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
YIPF1Q9Y548 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
YIPF1Q9Y548 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
YIPF1Q9Y548 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
YIPF1Q9Y548 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
YIPF1Q9Y548 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
YIPF1Q9Y548 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
YIPF1Q9Y548 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
YIPF1Q9Y548 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.18■□□□□ 0.18
YIPF1Q9Y548 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.18■□□□□ 0.18
YIPF1Q9Y548 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.18■□□□□ 0.18
YIPF1Q9Y548 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
YIPF1Q9Y548 AC004066.1-201ENST00000502488 802 ntBASIC16.18■□□□□ 0.18
YIPF1Q9Y548 RNA5SP486-201ENST00000515961 83 ntBASIC16.18■□□□□ 0.18
YIPF1Q9Y548 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
YIPF1Q9Y548 NOP2-211ENST00000540228 668 ntTSL 2 BASIC16.18■□□□□ 0.18
YIPF1Q9Y548 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.18■□□□□ 0.18
YIPF1Q9Y548 ECM1P1-201ENST00000604092 1279 ntBASIC16.18■□□□□ 0.18
YIPF1Q9Y548 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
YIPF1Q9Y548 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.18■□□□□ 0.18
YIPF1Q9Y548 AC132938.4-201ENST00000623835 848 ntBASIC16.18■□□□□ 0.18
YIPF1Q9Y548 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.18■□□□□ 0.18
YIPF1Q9Y548 PRSS30P-206ENST00000641773 873 ntBASIC16.18■□□□□ 0.18
YIPF1Q9Y548 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
YIPF1Q9Y548 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
YIPF1Q9Y548 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
YIPF1Q9Y548 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.18■□□□□ 0.18
YIPF1Q9Y548 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
YIPF1Q9Y548 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
YIPF1Q9Y548 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
YIPF1Q9Y548 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
YIPF1Q9Y548 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
YIPF1Q9Y548 AC007787.1-201ENST00000588095 1583 ntBASIC16.17■□□□□ 0.18
YIPF1Q9Y548 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
YIPF1Q9Y548 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
YIPF1Q9Y548 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.17■□□□□ 0.18
YIPF1Q9Y548 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
YIPF1Q9Y548 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
YIPF1Q9Y548 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
YIPF1Q9Y548 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
YIPF1Q9Y548 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms