Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 WASH6P-202ENST00000359512 1437 ntBASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 AC004870.1-201ENST00000315132 882 ntBASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 POM121L3P-201ENST00000419331 1163 ntBASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 AL845331.1-201ENST00000424978 1190 ntBASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 AC091167.2-201ENST00000579581 588 ntBASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 CYP2A7P1-201ENST00000595391 815 ntBASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 AL591122.2-201ENST00000624125 1853 ntBASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 AC118758.2-201ENST00000614242 2813 ntBASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.94□□□□□ -0.02
LRCH1Q9Y2L9 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRCH1Q9Y2L9 AL139385.1-201ENST00000611744 3272 ntBASIC14.93□□□□□ -0.02
LRCH1Q9Y2L9 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRCH1Q9Y2L9 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRCH1Q9Y2L9 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.93□□□□□ -0.02
LRCH1Q9Y2L9 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRCH1Q9Y2L9 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRCH1Q9Y2L9 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.93□□□□□ -0.02
LRCH1Q9Y2L9 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRCH1Q9Y2L9 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.93□□□□□ -0.02
LRCH1Q9Y2L9 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.93□□□□□ -0.02
LRCH1Q9Y2L9 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRCH1Q9Y2L9 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRCH1Q9Y2L9 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRCH1Q9Y2L9 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
LRCH1Q9Y2L9 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
LRCH1Q9Y2L9 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRCH1Q9Y2L9 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRCH1Q9Y2L9 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRCH1Q9Y2L9 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRCH1Q9Y2L9 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRCH1Q9Y2L9 FAAHP1-202ENST00000446499 1238 ntBASIC14.93□□□□□ -0.02
LRCH1Q9Y2L9 KRT16P4-201ENST00000453883 522 ntBASIC14.93□□□□□ -0.02
LRCH1Q9Y2L9 KRT18P31-201ENST00000506277 1292 ntBASIC14.93□□□□□ -0.02
LRCH1Q9Y2L9 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRCH1Q9Y2L9 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.93□□□□□ -0.02
LRCH1Q9Y2L9 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.93□□□□□ -0.02
LRCH1Q9Y2L9 AP005901.3-202ENST00000581653 237 ntBASIC14.93□□□□□ -0.02
LRCH1Q9Y2L9 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.93□□□□□ -0.02
LRCH1Q9Y2L9 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
LRCH1Q9Y2L9 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRCH1Q9Y2L9 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRCH1Q9Y2L9 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRCH1Q9Y2L9 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRCH1Q9Y2L9 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.93□□□□□ -0.02
LRCH1Q9Y2L9 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LRCH1Q9Y2L9 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.93□□□□□ -0.02
LRCH1Q9Y2L9 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRCH1Q9Y2L9 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.93□□□□□ -0.02
LRCH1Q9Y2L9 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRCH1Q9Y2L9 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRCH1Q9Y2L9 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.92□□□□□ -0.02
LRCH1Q9Y2L9 MTHFR-210ENST00000641407 2387 ntBASIC14.92□□□□□ -0.02
LRCH1Q9Y2L9 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LRCH1Q9Y2L9 NUTM2HP-201ENST00000442076 2498 ntBASIC14.92□□□□□ -0.02
LRCH1Q9Y2L9 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.92□□□□□ -0.02
LRCH1Q9Y2L9 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRCH1Q9Y2L9 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.92□□□□□ -0.02
LRCH1Q9Y2L9 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
LRCH1Q9Y2L9 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms