Protein–RNA interactions for Protein: Q9Y259

CHKB, Choline/ethanolamine kinase, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKBQ9Y259 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.12■□□□□ 0.17
CHKBQ9Y259 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHKBQ9Y259 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHKBQ9Y259 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.11■□□□□ 0.17
CHKBQ9Y259 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHKBQ9Y259 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHKBQ9Y259 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.11■□□□□ 0.17
CHKBQ9Y259 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.11■□□□□ 0.17
CHKBQ9Y259 AC104581.4-201ENST00000623126 3052 ntBASIC16.11■□□□□ 0.17
CHKBQ9Y259 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHKBQ9Y259 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHKBQ9Y259 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CHKBQ9Y259 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHKBQ9Y259 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.11■□□□□ 0.17
CHKBQ9Y259 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.11■□□□□ 0.17
CHKBQ9Y259 AC055876.3-201ENST00000431496 288 ntBASIC16.11■□□□□ 0.17
CHKBQ9Y259 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHKBQ9Y259 CYMP-203ENST00000474680 1263 ntBASIC16.11■□□□□ 0.17
CHKBQ9Y259 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.11■□□□□ 0.17
CHKBQ9Y259 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.11■□□□□ 0.17
CHKBQ9Y259 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.11■□□□□ 0.17
CHKBQ9Y259 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHKBQ9Y259 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.11■□□□□ 0.17
CHKBQ9Y259 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHKBQ9Y259 AC138649.4-201ENST00000612222 287 ntBASIC16.11■□□□□ 0.17
CHKBQ9Y259 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHKBQ9Y259 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHKBQ9Y259 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.11■□□□□ 0.17
CHKBQ9Y259 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHKBQ9Y259 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHKBQ9Y259 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHKBQ9Y259 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CHKBQ9Y259 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHKBQ9Y259 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.11■□□□□ 0.17
CHKBQ9Y259 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CHKBQ9Y259 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHKBQ9Y259 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHKBQ9Y259 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.11■□□□□ 0.17
CHKBQ9Y259 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHKBQ9Y259 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHKBQ9Y259 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHKBQ9Y259 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHKBQ9Y259 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHKBQ9Y259 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHKBQ9Y259 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CHKBQ9Y259 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CHKBQ9Y259 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHKBQ9Y259 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHKBQ9Y259 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.1■□□□□ 0.17
CHKBQ9Y259 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHKBQ9Y259 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHKBQ9Y259 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHKBQ9Y259 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHKBQ9Y259 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.1■□□□□ 0.17
CHKBQ9Y259 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHKBQ9Y259 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CHKBQ9Y259 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHKBQ9Y259 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHKBQ9Y259 HIST3H2BA-201ENST00000436555 524 ntBASIC16.1■□□□□ 0.17
CHKBQ9Y259 PHKG1P2-201ENST00000457537 863 ntBASIC16.1■□□□□ 0.17
CHKBQ9Y259 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.1■□□□□ 0.17
CHKBQ9Y259 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.1■□□□□ 0.17
CHKBQ9Y259 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.1■□□□□ 0.17
CHKBQ9Y259 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.1■□□□□ 0.17
CHKBQ9Y259 AL390955.2-201ENST00000603032 514 ntBASIC16.1■□□□□ 0.17
CHKBQ9Y259 AL450472.2-201ENST00000603663 1156 ntBASIC16.1■□□□□ 0.17
CHKBQ9Y259 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHKBQ9Y259 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CHKBQ9Y259 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHKBQ9Y259 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CHKBQ9Y259 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHKBQ9Y259 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CHKBQ9Y259 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CHKBQ9Y259 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
CHKBQ9Y259 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHKBQ9Y259 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.1■□□□□ 0.17
CHKBQ9Y259 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
CHKBQ9Y259 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CHKBQ9Y259 AC007191.1-201ENST00000623179 2995 ntBASIC16.1■□□□□ 0.17
CHKBQ9Y259 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHKBQ9Y259 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHKBQ9Y259 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.1■□□□□ 0.17
CHKBQ9Y259 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
CHKBQ9Y259 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHKBQ9Y259 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.1■□□□□ 0.17
CHKBQ9Y259 LINC01101-201ENST00000622953 1884 ntBASIC16.1■□□□□ 0.17
CHKBQ9Y259 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.1■□□□□ 0.17
CHKBQ9Y259 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CHKBQ9Y259 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
CHKBQ9Y259 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.09■□□□□ 0.17
CHKBQ9Y259 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHKBQ9Y259 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHKBQ9Y259 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHKBQ9Y259 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHKBQ9Y259 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHKBQ9Y259 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHKBQ9Y259 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC16.09■□□□□ 0.17
CHKBQ9Y259 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHKBQ9Y259 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.09■□□□□ 0.17
CHKBQ9Y259 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms