Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PCDHGC3Q9UN70 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGC3Q9UN70 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGC3Q9UN70 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGC3Q9UN70 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGC3Q9UN70 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGC3Q9UN70 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHGC3Q9UN70 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGC3Q9UN70 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGC3Q9UN70 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGC3Q9UN70 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGC3Q9UN70 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGC3Q9UN70 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGC3Q9UN70 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PCDHGC3Q9UN70 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGC3Q9UN70 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHGC3Q9UN70 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGC3Q9UN70 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.44■□□□□ 0.22
PCDHGC3Q9UN70 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGC3Q9UN70 GAPDHP40-201ENST00000505218 1006 ntBASIC16.44■□□□□ 0.22
PCDHGC3Q9UN70 MTND2P7-201ENST00000521337 640 ntBASIC16.44■□□□□ 0.22
PCDHGC3Q9UN70 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.44■□□□□ 0.22
PCDHGC3Q9UN70 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGC3Q9UN70 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.44■□□□□ 0.22
PCDHGC3Q9UN70 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.44■□□□□ 0.22
PCDHGC3Q9UN70 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGC3Q9UN70 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PCDHGC3Q9UN70 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGC3Q9UN70 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.44■□□□□ 0.22
PCDHGC3Q9UN70 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGC3Q9UN70 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.44■□□□□ 0.22
PCDHGC3Q9UN70 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PCDHGC3Q9UN70 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
PCDHGC3Q9UN70 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHGC3Q9UN70 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGC3Q9UN70 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PCDHGC3Q9UN70 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.44■□□□□ 0.22
PCDHGC3Q9UN70 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 MST1L-201ENST00000442552 2185 ntBASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 RN7SL399P-201ENST00000471648 279 ntBASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 AC093004.1-201ENST00000508850 424 ntBASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 SPCS2P1-201ENST00000561636 679 ntBASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 AC036164.1-201ENST00000570544 333 ntBASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 AL096865.1-201ENST00000606796 927 ntBASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 AC099568.2-201ENST00000609194 695 ntBASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGC3Q9UN70 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms