Protein–RNA interactions for Protein: Q9UBE8

NLK, Serine/threonine-protein kinase NLK, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLKQ9UBE8 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.98□□□□□ -0.17
NLKQ9UBE8 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NLKQ9UBE8 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NLKQ9UBE8 MIR940-201ENST00000401276 94 ntBASIC13.98□□□□□ -0.17
NLKQ9UBE8 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NLKQ9UBE8 PMS2P4-201ENST00000412466 1052 ntBASIC13.98□□□□□ -0.17
NLKQ9UBE8 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.98□□□□□ -0.17
NLKQ9UBE8 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NLKQ9UBE8 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NLKQ9UBE8 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
NLKQ9UBE8 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NLKQ9UBE8 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.98□□□□□ -0.17
NLKQ9UBE8 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
NLKQ9UBE8 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.98□□□□□ -0.17
NLKQ9UBE8 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.98□□□□□ -0.17
NLKQ9UBE8 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.98□□□□□ -0.17
NLKQ9UBE8 KRT18P58-201ENST00000527480 1120 ntBASIC13.98□□□□□ -0.17
NLKQ9UBE8 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
NLKQ9UBE8 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NLKQ9UBE8 AC105250.1-201ENST00000509378 2057 ntBASIC13.98□□□□□ -0.17
NLKQ9UBE8 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NLKQ9UBE8 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
NLKQ9UBE8 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NLKQ9UBE8 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NLKQ9UBE8 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
NLKQ9UBE8 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NLKQ9UBE8 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NLKQ9UBE8 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NLKQ9UBE8 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NLKQ9UBE8 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.98□□□□□ -0.17
NLKQ9UBE8 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.98□□□□□ -0.17
NLKQ9UBE8 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NLKQ9UBE8 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NLKQ9UBE8 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NLKQ9UBE8 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
NLKQ9UBE8 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
NLKQ9UBE8 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NLKQ9UBE8 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NLKQ9UBE8 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NLKQ9UBE8 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
NLKQ9UBE8 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NLKQ9UBE8 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.97□□□□□ -0.17
NLKQ9UBE8 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.97□□□□□ -0.17
NLKQ9UBE8 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.97□□□□□ -0.17
NLKQ9UBE8 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
NLKQ9UBE8 AJ011931.1-201ENST00000618749 2492 ntBASIC13.97□□□□□ -0.17
NLKQ9UBE8 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NLKQ9UBE8 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
NLKQ9UBE8 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NLKQ9UBE8 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NLKQ9UBE8 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NLKQ9UBE8 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NLKQ9UBE8 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NLKQ9UBE8 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.97□□□□□ -0.17
NLKQ9UBE8 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.97□□□□□ -0.17
NLKQ9UBE8 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13.97□□□□□ -0.17
NLKQ9UBE8 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
NLKQ9UBE8 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.97□□□□□ -0.17
NLKQ9UBE8 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
NLKQ9UBE8 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.97□□□□□ -0.17
NLKQ9UBE8 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.97□□□□□ -0.17
NLKQ9UBE8 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.97□□□□□ -0.17
NLKQ9UBE8 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.97□□□□□ -0.17
NLKQ9UBE8 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.97□□□□□ -0.17
NLKQ9UBE8 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.97□□□□□ -0.17
NLKQ9UBE8 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.97□□□□□ -0.17
NLKQ9UBE8 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NLKQ9UBE8 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NLKQ9UBE8 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.97□□□□□ -0.17
NLKQ9UBE8 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NLKQ9UBE8 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NLKQ9UBE8 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.97□□□□□ -0.17
NLKQ9UBE8 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.97□□□□□ -0.17
NLKQ9UBE8 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NLKQ9UBE8 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NLKQ9UBE8 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NLKQ9UBE8 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.97□□□□□ -0.17
NLKQ9UBE8 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
NLKQ9UBE8 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NLKQ9UBE8 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
NLKQ9UBE8 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NLKQ9UBE8 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NLKQ9UBE8 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
NLKQ9UBE8 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.96□□□□□ -0.17
NLKQ9UBE8 MROH4P-201ENST00000431302 1578 ntBASIC13.96□□□□□ -0.17
NLKQ9UBE8 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NLKQ9UBE8 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
NLKQ9UBE8 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
NLKQ9UBE8 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NLKQ9UBE8 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
NLKQ9UBE8 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
NLKQ9UBE8 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.96□□□□□ -0.17
NLKQ9UBE8 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.96□□□□□ -0.17
NLKQ9UBE8 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
NLKQ9UBE8 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NLKQ9UBE8 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
NLKQ9UBE8 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
NLKQ9UBE8 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.96□□□□□ -0.17
NLKQ9UBE8 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.96□□□□□ -0.17
NLKQ9UBE8 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms