Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HMG20BQ9P0W2 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMG20BQ9P0W2 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMG20BQ9P0W2 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.95■□□□□ 0.62
HMG20BQ9P0W2 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
HMG20BQ9P0W2 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMG20BQ9P0W2 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMG20BQ9P0W2 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
HMG20BQ9P0W2 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.94■□□□□ 0.62
HMG20BQ9P0W2 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMG20BQ9P0W2 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
HMG20BQ9P0W2 SSR4P1-203ENST00000599569 2260 ntBASIC18.94■□□□□ 0.62
HMG20BQ9P0W2 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMG20BQ9P0W2 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMG20BQ9P0W2 AC104640.1-201ENST00000562617 2109 ntBASIC18.94■□□□□ 0.62
HMG20BQ9P0W2 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMG20BQ9P0W2 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMG20BQ9P0W2 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
HMG20BQ9P0W2 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMG20BQ9P0W2 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
HMG20BQ9P0W2 SOCS2P1-201ENST00000417727 557 ntBASIC18.94■□□□□ 0.62
HMG20BQ9P0W2 ACTG1P3-201ENST00000431775 1114 ntBASIC18.94■□□□□ 0.62
HMG20BQ9P0W2 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.94■□□□□ 0.62
HMG20BQ9P0W2 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC18.94■□□□□ 0.62
HMG20BQ9P0W2 GPR53P-205ENST00000457298 1084 ntBASIC18.94■□□□□ 0.62
HMG20BQ9P0W2 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.94■□□□□ 0.62
HMG20BQ9P0W2 AC126177.1-201ENST00000547829 2218 ntBASIC18.94■□□□□ 0.62
HMG20BQ9P0W2 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.94■□□□□ 0.62
HMG20BQ9P0W2 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMG20BQ9P0W2 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.94■□□□□ 0.62
HMG20BQ9P0W2 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMG20BQ9P0W2 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18.94■□□□□ 0.62
HMG20BQ9P0W2 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
HMG20BQ9P0W2 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMG20BQ9P0W2 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
HMG20BQ9P0W2 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
HMG20BQ9P0W2 AC092127.1-201ENST00000567093 3455 ntBASIC18.94■□□□□ 0.62
HMG20BQ9P0W2 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.94■□□□□ 0.62
HMG20BQ9P0W2 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.94■□□□□ 0.62
HMG20BQ9P0W2 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMG20BQ9P0W2 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 ACA64.2-201ENST00000459014 129 ntBASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 ENPP7P5-201ENST00000541031 1031 ntBASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 TBCB-211ENST00000589996 724 ntTSL 3 BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 AC015936.2-201ENST00000593177 259 ntBASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 AC107373.2-201ENST00000607735 490 ntBASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 AC005252.2-201ENST00000624630 1141 ntBASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMG20BQ9P0W2 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.92■□□□□ 0.62
HMG20BQ9P0W2 AL139384.1-201ENST00000612143 3047 ntBASIC18.92■□□□□ 0.62
HMG20BQ9P0W2 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.92■□□□□ 0.62
HMG20BQ9P0W2 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.92■□□□□ 0.62
HMG20BQ9P0W2 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
HMG20BQ9P0W2 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.92■□□□□ 0.62
HMG20BQ9P0W2 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
HMG20BQ9P0W2 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMG20BQ9P0W2 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMG20BQ9P0W2 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMG20BQ9P0W2 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms