Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 AL139384.1-201ENST00000612143 3047 ntBASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 CNN2P10-201ENST00000443067 918 ntBASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 RN7SL48P-201ENST00000579283 293 ntBASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 AL021578.1-201ENST00000613646 709 ntBASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 PRSS30P-206ENST00000641773 873 ntBASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 AC018735.1-201ENST00000437208 1502 ntBASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 AC015818.8-201ENST00000587907 1519 ntBASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 AC007787.1-201ENST00000588095 1583 ntBASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 AL158070.2-201ENST00000623713 1621 ntBASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
HCFC1R1Q9NWW0 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 AC010491.1-201ENST00000563101 2797 ntBASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 AL139094.1-201ENST00000405549 1188 ntBASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 AC004945.1-201ENST00000416738 983 ntBASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 NUS1P3-201ENST00000423502 862 ntBASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 ACTG1P17-201ENST00000558391 1119 ntBASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 AC024909.3-201ENST00000611513 2257 ntBASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HCFC1R1Q9NWW0 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HCFC1R1Q9NWW0 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
HCFC1R1Q9NWW0 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.05■□□□□ 0.16
HCFC1R1Q9NWW0 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
HCFC1R1Q9NWW0 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms