Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 AC136604.1-201ENST00000418535 575 ntBASIC13.73□□□□□ -0.21
CDH20Q9HBT6 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 AC004890.2-204ENST00000481968 304 ntBASIC13.73□□□□□ -0.21
CDH20Q9HBT6 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 TARDBPP1-201ENST00000442013 1203 ntBASIC13.72□□□□□ -0.21
CDH20Q9HBT6 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 ZNF890P-202ENST00000530367 1156 ntBASIC13.72□□□□□ -0.21
CDH20Q9HBT6 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 AC135586.1-201ENST00000539323 574 ntBASIC13.72□□□□□ -0.21
CDH20Q9HBT6 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 TIMM17BP1-201ENST00000545713 516 ntBASIC13.72□□□□□ -0.21
CDH20Q9HBT6 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 AJ011932.1-201ENST00000621707 465 ntBASIC13.72□□□□□ -0.21
CDH20Q9HBT6 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 BTBD7P1-201ENST00000447253 1453 ntBASIC13.72□□□□□ -0.21
CDH20Q9HBT6 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.72□□□□□ -0.21
CDH20Q9HBT6 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CDH20Q9HBT6 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
CDH20Q9HBT6 AL607033.1-201ENST00000623900 1599 ntBASIC13.71□□□□□ -0.21
CDH20Q9HBT6 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDH20Q9HBT6 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.71□□□□□ -0.21
CDH20Q9HBT6 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDH20Q9HBT6 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CDH20Q9HBT6 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CDH20Q9HBT6 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDH20Q9HBT6 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.71□□□□□ -0.21
CDH20Q9HBT6 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms