Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC19.27■□□□□ 0.68
UPF2Q9HAU5 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPF2Q9HAU5 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.27■□□□□ 0.68
UPF2Q9HAU5 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPF2Q9HAU5 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPF2Q9HAU5 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPF2Q9HAU5 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.27■□□□□ 0.68
UPF2Q9HAU5 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19.27■□□□□ 0.68
UPF2Q9HAU5 AC061975.2-201ENST00000581722 295 ntBASIC19.27■□□□□ 0.68
UPF2Q9HAU5 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.27■□□□□ 0.68
UPF2Q9HAU5 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
UPF2Q9HAU5 AC139749.1-202ENST00000617529 3139 ntBASIC19.27■□□□□ 0.68
UPF2Q9HAU5 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
UPF2Q9HAU5 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC19.27■□□□□ 0.68
UPF2Q9HAU5 RDX-218ENST00000544551 4117 ntTSL 2 BASIC19.27■□□□□ 0.68
UPF2Q9HAU5 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC19.27■□□□□ 0.68
UPF2Q9HAU5 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPF2Q9HAU5 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
UPF2Q9HAU5 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
UPF2Q9HAU5 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
UPF2Q9HAU5 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC19.27■□□□□ 0.67
UPF2Q9HAU5 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
UPF2Q9HAU5 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.26■□□□□ 0.67
UPF2Q9HAU5 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
UPF2Q9HAU5 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
UPF2Q9HAU5 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
UPF2Q9HAU5 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC19.26■□□□□ 0.67
UPF2Q9HAU5 AMT-204ENST00000427987 1646 ntTSL 5 BASIC19.26■□□□□ 0.67
UPF2Q9HAU5 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC19.26■□□□□ 0.67
UPF2Q9HAU5 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UPF2Q9HAU5 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UPF2Q9HAU5 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC19.26■□□□□ 0.67
UPF2Q9HAU5 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
UPF2Q9HAU5 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC19.26■□□□□ 0.67
UPF2Q9HAU5 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UPF2Q9HAU5 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UPF2Q9HAU5 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
UPF2Q9HAU5 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
UPF2Q9HAU5 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC19.26■□□□□ 0.67
UPF2Q9HAU5 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.26■□□□□ 0.67
UPF2Q9HAU5 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC19.26■□□□□ 0.67
UPF2Q9HAU5 SPTSSB-204ENST00000617024 1292 ntBASIC19.26■□□□□ 0.67
UPF2Q9HAU5 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
UPF2Q9HAU5 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
UPF2Q9HAU5 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UPF2Q9HAU5 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
UPF2Q9HAU5 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
UPF2Q9HAU5 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC19.26■□□□□ 0.67
UPF2Q9HAU5 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC19.26■□□□□ 0.67
UPF2Q9HAU5 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UPF2Q9HAU5 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC19.26■□□□□ 0.67
UPF2Q9HAU5 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UPF2Q9HAU5 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UPF2Q9HAU5 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
UPF2Q9HAU5 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC19.25■□□□□ 0.67
UPF2Q9HAU5 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UPF2Q9HAU5 UCKL1-AS1-201ENST00000623569 3602 ntBASIC19.25■□□□□ 0.67
UPF2Q9HAU5 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UPF2Q9HAU5 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC19.25■□□□□ 0.67
UPF2Q9HAU5 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
UPF2Q9HAU5 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC19.25■□□□□ 0.67
UPF2Q9HAU5 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UPF2Q9HAU5 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UPF2Q9HAU5 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC19.25■□□□□ 0.67
UPF2Q9HAU5 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
UPF2Q9HAU5 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UPF2Q9HAU5 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.25■□□□□ 0.67
UPF2Q9HAU5 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
UPF2Q9HAU5 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UPF2Q9HAU5 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
UPF2Q9HAU5 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
UPF2Q9HAU5 AC098831.1-202ENST00000438821 336 ntBASIC19.25■□□□□ 0.67
UPF2Q9HAU5 AC009947.1-201ENST00000444350 727 ntBASIC19.25■□□□□ 0.67
UPF2Q9HAU5 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
UPF2Q9HAU5 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
UPF2Q9HAU5 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.25■□□□□ 0.67
UPF2Q9HAU5 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.25■□□□□ 0.67
UPF2Q9HAU5 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
UPF2Q9HAU5 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
UPF2Q9HAU5 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
UPF2Q9HAU5 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UPF2Q9HAU5 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UPF2Q9HAU5 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
UPF2Q9HAU5 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPF2Q9HAU5 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
UPF2Q9HAU5 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
UPF2Q9HAU5 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPF2Q9HAU5 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC19.24■□□□□ 0.67
UPF2Q9HAU5 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UPF2Q9HAU5 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.24■□□□□ 0.67
UPF2Q9HAU5 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPF2Q9HAU5 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UPF2Q9HAU5 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.24■□□□□ 0.67
UPF2Q9HAU5 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPF2Q9HAU5 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
UPF2Q9HAU5 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPF2Q9HAU5 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPF2Q9HAU5 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPF2Q9HAU5 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.24■□□□□ 0.67
UPF2Q9HAU5 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms