Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 AC073592.8-201ENST00000624126 511 ntBASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 TCAF2P1-201ENST00000291129 2421 ntBASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 AC148477.4-201ENST00000613430 1793 ntBASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.89■□□□□ 0.14
LRRC40Q9H9A6 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC40Q9H9A6 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC40Q9H9A6 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC40Q9H9A6 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.89■□□□□ 0.13
LRRC40Q9H9A6 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
LRRC40Q9H9A6 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC40Q9H9A6 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
LRRC40Q9H9A6 AC084364.1-201ENST00000551967 1556 ntBASIC15.89■□□□□ 0.13
LRRC40Q9H9A6 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC40Q9H9A6 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC40Q9H9A6 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC40Q9H9A6 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC40Q9H9A6 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
LRRC40Q9H9A6 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC40Q9H9A6 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.89■□□□□ 0.13
LRRC40Q9H9A6 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.89■□□□□ 0.13
LRRC40Q9H9A6 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.89■□□□□ 0.13
LRRC40Q9H9A6 RN7SL618P-201ENST00000477850 296 ntBASIC15.89■□□□□ 0.13
LRRC40Q9H9A6 AC067863.1-201ENST00000494933 530 ntBASIC15.89■□□□□ 0.13
LRRC40Q9H9A6 AC069120.2-201ENST00000524091 540 ntBASIC15.89■□□□□ 0.13
LRRC40Q9H9A6 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.89■□□□□ 0.13
LRRC40Q9H9A6 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.89■□□□□ 0.13
LRRC40Q9H9A6 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.89■□□□□ 0.13
LRRC40Q9H9A6 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC40Q9H9A6 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.89■□□□□ 0.13
LRRC40Q9H9A6 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC40Q9H9A6 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.89■□□□□ 0.13
LRRC40Q9H9A6 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
LRRC40Q9H9A6 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.89■□□□□ 0.13
LRRC40Q9H9A6 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.89■□□□□ 0.13
LRRC40Q9H9A6 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC40Q9H9A6 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC40Q9H9A6 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC40Q9H9A6 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC40Q9H9A6 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
LRRC40Q9H9A6 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
LRRC40Q9H9A6 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC40Q9H9A6 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
LRRC40Q9H9A6 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC40Q9H9A6 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC40Q9H9A6 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC40Q9H9A6 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
LRRC40Q9H9A6 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC40Q9H9A6 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.88■□□□□ 0.13
LRRC40Q9H9A6 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC40Q9H9A6 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC40Q9H9A6 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC40Q9H9A6 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC40Q9H9A6 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC40Q9H9A6 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.88■□□□□ 0.13
LRRC40Q9H9A6 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC40Q9H9A6 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC40Q9H9A6 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC40Q9H9A6 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
LRRC40Q9H9A6 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
LRRC40Q9H9A6 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.88■□□□□ 0.13
LRRC40Q9H9A6 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.88■□□□□ 0.13
LRRC40Q9H9A6 AC107890.1-201ENST00000422478 521 ntBASIC15.88■□□□□ 0.13
LRRC40Q9H9A6 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.88■□□□□ 0.13
LRRC40Q9H9A6 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC40Q9H9A6 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.88■□□□□ 0.13
LRRC40Q9H9A6 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.88■□□□□ 0.13
LRRC40Q9H9A6 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.88■□□□□ 0.13
LRRC40Q9H9A6 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC40Q9H9A6 AL512361.1-201ENST00000554200 418 ntBASIC15.88■□□□□ 0.13
LRRC40Q9H9A6 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
LRRC40Q9H9A6 AC140878.1-201ENST00000565277 250 ntBASIC15.88■□□□□ 0.13
LRRC40Q9H9A6 AC051619.7-201ENST00000568314 623 ntBASIC15.88■□□□□ 0.13
LRRC40Q9H9A6 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.88■□□□□ 0.13
LRRC40Q9H9A6 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.88■□□□□ 0.13
LRRC40Q9H9A6 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.88■□□□□ 0.13
LRRC40Q9H9A6 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.88■□□□□ 0.13
LRRC40Q9H9A6 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC40Q9H9A6 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC40Q9H9A6 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
LRRC40Q9H9A6 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.88■□□□□ 0.13
LRRC40Q9H9A6 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
LRRC40Q9H9A6 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms