Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF41Q9H4P4 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF41Q9H4P4 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF41Q9H4P4 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF41Q9H4P4 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF41Q9H4P4 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF41Q9H4P4 RN7SL692P-201ENST00000464677 288 ntBASIC18.36■□□□□ 0.53
RNF41Q9H4P4 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RNF41Q9H4P4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RNF41Q9H4P4 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF41Q9H4P4 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF41Q9H4P4 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF41Q9H4P4 AC120045.2-201ENST00000567334 178 ntBASIC18.36■□□□□ 0.53
RNF41Q9H4P4 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF41Q9H4P4 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF41Q9H4P4 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.36■□□□□ 0.53
RNF41Q9H4P4 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
RNF41Q9H4P4 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.36■□□□□ 0.53
RNF41Q9H4P4 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF41Q9H4P4 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF41Q9H4P4 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF41Q9H4P4 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.36■□□□□ 0.53
RNF41Q9H4P4 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
RNF41Q9H4P4 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF41Q9H4P4 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 AC093813.1-201ENST00000605066 256 ntBASIC18.35■□□□□ 0.53
RNF41Q9H4P4 WFDC1-204ENST00000613603 549 ntBASIC18.35■□□□□ 0.53
RNF41Q9H4P4 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 AC105233.6-201ENST00000642093 218 ntBASIC18.35■□□□□ 0.53
RNF41Q9H4P4 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF41Q9H4P4 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF41Q9H4P4 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF41Q9H4P4 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF41Q9H4P4 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF41Q9H4P4 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF41Q9H4P4 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
RNF41Q9H4P4 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF41Q9H4P4 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.34■□□□□ 0.53
RNF41Q9H4P4 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.34■□□□□ 0.53
RNF41Q9H4P4 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF41Q9H4P4 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.34■□□□□ 0.53
RNF41Q9H4P4 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF41Q9H4P4 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF41Q9H4P4 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF41Q9H4P4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.34■□□□□ 0.53
RNF41Q9H4P4 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.34■□□□□ 0.53
RNF41Q9H4P4 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF41Q9H4P4 C1QBPP1-201ENST00000400117 770 ntBASIC18.34■□□□□ 0.53
RNF41Q9H4P4 SOCS2P1-201ENST00000417727 557 ntBASIC18.34■□□□□ 0.53
RNF41Q9H4P4 AP005018.1-201ENST00000525475 301 ntBASIC18.34■□□□□ 0.53
RNF41Q9H4P4 AL359711.2-201ENST00000563105 872 ntBASIC18.34■□□□□ 0.53
RNF41Q9H4P4 AL596325.1-201ENST00000563991 1082 ntBASIC18.34■□□□□ 0.53
RNF41Q9H4P4 AC124283.3-201ENST00000570869 594 ntBASIC18.34■□□□□ 0.53
RNF41Q9H4P4 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RNF41Q9H4P4 AC107373.2-201ENST00000607735 490 ntBASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms