Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 WASH3P-207ENST00000560956 1394 ntBASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 FO538757.1-201ENST00000623083 1397 ntBASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 AL353705.2-201ENST00000428243 662 ntBASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 AC055717.3-201ENST00000622967 595 ntBASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC12.07□□□□□ -0.48
SHANK2-AS3Q9BTD1 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 MCCD1P2-201ENST00000423228 335 ntBASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 AL592309.1-201ENST00000443127 649 ntBASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 AC069335.1-201ENST00000489972 472 ntBASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.06□□□□□ -0.48
SHANK2-AS3Q9BTD1 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms