Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SMOQ99835 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMOQ99835 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.29■□□□□ 0.2
SMOQ99835 AC093433.1-201ENST00000458048 571 ntBASIC16.29■□□□□ 0.2
SMOQ99835 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.29■□□□□ 0.2
SMOQ99835 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.29■□□□□ 0.2
SMOQ99835 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.29■□□□□ 0.2
SMOQ99835 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
SMOQ99835 TDH-203ENST00000531764 1110 ntBASIC16.29■□□□□ 0.2
SMOQ99835 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.29■□□□□ 0.2
SMOQ99835 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.29■□□□□ 0.2
SMOQ99835 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.29■□□□□ 0.2
SMOQ99835 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMOQ99835 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.29■□□□□ 0.2
SMOQ99835 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SMOQ99835 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SMOQ99835 AC105917.1-201ENST00000506637 2539 ntBASIC16.29■□□□□ 0.2
SMOQ99835 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.29■□□□□ 0.2
SMOQ99835 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SMOQ99835 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMOQ99835 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SMOQ99835 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SMOQ99835 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SMOQ99835 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMOQ99835 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMOQ99835 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMOQ99835 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMOQ99835 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SMOQ99835 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SMOQ99835 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.28■□□□□ 0.2
SMOQ99835 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SMOQ99835 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMOQ99835 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.28■□□□□ 0.2
SMOQ99835 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
SMOQ99835 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.28■□□□□ 0.2
SMOQ99835 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMOQ99835 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.28■□□□□ 0.2
SMOQ99835 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMOQ99835 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMOQ99835 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
SMOQ99835 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.28■□□□□ 0.2
SMOQ99835 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMOQ99835 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMOQ99835 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SMOQ99835 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
SMOQ99835 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMOQ99835 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.28■□□□□ 0.2
SMOQ99835 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.28■□□□□ 0.2
SMOQ99835 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.28■□□□□ 0.2
SMOQ99835 AP001063.1-201ENST00000568332 529 ntBASIC16.28■□□□□ 0.2
SMOQ99835 AC015936.2-201ENST00000593177 259 ntBASIC16.28■□□□□ 0.2
SMOQ99835 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.28■□□□□ 0.2
SMOQ99835 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.28■□□□□ 0.2
SMOQ99835 AL645728.2-202ENST00000641679 227 ntBASIC16.28■□□□□ 0.2
SMOQ99835 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMOQ99835 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SMOQ99835 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SMOQ99835 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMOQ99835 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMOQ99835 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.28■□□□□ 0.2
SMOQ99835 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMOQ99835 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SMOQ99835 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.28■□□□□ 0.2
SMOQ99835 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.28■□□□□ 0.2
SMOQ99835 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMOQ99835 HYMAI-201ENST00000635591 3347 ntBASIC16.28■□□□□ 0.2
SMOQ99835 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMOQ99835 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMOQ99835 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SMOQ99835 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMOQ99835 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
SMOQ99835 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMOQ99835 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.28■□□□□ 0.2
SMOQ99835 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SMOQ99835 AC112693.3-201ENST00000624819 1983 ntBASIC16.27■□□□□ 0.2
SMOQ99835 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMOQ99835 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMOQ99835 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMOQ99835 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMOQ99835 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMOQ99835 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMOQ99835 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.27■□□□□ 0.2
SMOQ99835 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.27■□□□□ 0.2
SMOQ99835 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SMOQ99835 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.27■□□□□ 0.2
SMOQ99835 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMOQ99835 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.27■□□□□ 0.2
SMOQ99835 CICP11-201ENST00000434745 2827 ntBASIC16.27■□□□□ 0.2
SMOQ99835 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMOQ99835 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SMOQ99835 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.27■□□□□ 0.2
SMOQ99835 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.27■□□□□ 0.2
SMOQ99835 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMOQ99835 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.27■□□□□ 0.2
SMOQ99835 AC079776.1-201ENST00000401540 1152 ntBASIC16.27■□□□□ 0.2
SMOQ99835 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.27■□□□□ 0.2
SMOQ99835 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SMOQ99835 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SMOQ99835 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMOQ99835 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms