Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AL139094.1-201ENST00000405549 1188 ntBASIC4.58□□□□□ -1.68
HMCN1Q96RW7 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HMCN1Q96RW7 APRT-202ENST00000426324 664 ntTSL 2 BASIC4.58□□□□□ -1.68
HMCN1Q96RW7 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HMCN1Q96RW7 BX284656.1-201ENST00000446364 668 ntTSL 3 BASIC4.58□□□□□ -1.68
HMCN1Q96RW7 SYS1-DBNDD2-202ENST00000452133 674 ntAPPRIS ALT2 TSL 3 BASIC4.58□□□□□ -1.68
HMCN1Q96RW7 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC4.58□□□□□ -1.68
HMCN1Q96RW7 TRAIP-202ENST00000469027 1145 ntTSL 5 BASIC4.58□□□□□ -1.68
HMCN1Q96RW7 RN7SL582P-201ENST00000491078 279 ntBASIC4.58□□□□□ -1.68
HMCN1Q96RW7 AP001979.2-201ENST00000526254 975 ntTSL 5 BASIC4.58□□□□□ -1.68
HMCN1Q96RW7 AC131206.1-201ENST00000538078 1211 ntBASIC4.58□□□□□ -1.68
HMCN1Q96RW7 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC4.58□□□□□ -1.68
HMCN1Q96RW7 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC4.58□□□□□ -1.68
HMCN1Q96RW7 ABCD1P3-201ENST00000562927 605 ntBASIC4.58□□□□□ -1.68
HMCN1Q96RW7 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HMCN1Q96RW7 AC138627.1-201ENST00000641127 1257 ntBASIC4.58□□□□□ -1.68
HMCN1Q96RW7 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HMCN1Q96RW7 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC4.58□□□□□ -1.68
HMCN1Q96RW7 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC4.58□□□□□ -1.68
HMCN1Q96RW7 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HMCN1Q96RW7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
HMCN1Q96RW7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HMCN1Q96RW7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HMCN1Q96RW7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HMCN1Q96RW7 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC4.58□□□□□ -1.68
HMCN1Q96RW7 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HMCN1Q96RW7 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HMCN1Q96RW7 VKORC1-203ENST00000354895 901 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HMCN1Q96RW7 OR51A9P-201ENST00000422578 911 ntBASIC4.58□□□□□ -1.68
HMCN1Q96RW7 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
HMCN1Q96RW7 AC098934.1-203ENST00000442868 1262 ntBASIC4.58□□□□□ -1.68
HMCN1Q96RW7 RNF7-205ENST00000480908 782 ntTSL 4 BASIC4.58□□□□□ -1.68
HMCN1Q96RW7 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC4.58□□□□□ -1.68
HMCN1Q96RW7 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC4.58□□□□□ -1.68
HMCN1Q96RW7 HNRNPA1P5-201ENST00000558213 966 ntBASIC4.58□□□□□ -1.68
HMCN1Q96RW7 PRR20FP-201ENST00000603320 180 ntBASIC4.58□□□□□ -1.68
HMCN1Q96RW7 DUSP22-206ENST00000603453 804 ntTSL 4 BASIC4.58□□□□□ -1.68
HMCN1Q96RW7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
HMCN1Q96RW7 FKBP4P8-201ENST00000610931 1369 ntBASIC4.58□□□□□ -1.68
HMCN1Q96RW7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HMCN1Q96RW7 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
HMCN1Q96RW7 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC4.58□□□□□ -1.68
HMCN1Q96RW7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HMCN1Q96RW7 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC4.58□□□□□ -1.68
HMCN1Q96RW7 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 CTLA4-201ENST00000295854 525 ntTSL 5 BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 AC104961.1-201ENST00000427605 771 ntBASIC4.57□□□□□ -1.68
HMCN1Q96RW7 AP000281.2-201ENST00000427911 384 ntTSL 3 BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 RN7SL523P-201ENST00000484401 298 ntBASIC4.57□□□□□ -1.68
HMCN1Q96RW7 AC147876.1-201ENST00000504408 322 ntBASIC4.57□□□□□ -1.68
HMCN1Q96RW7 AP001922.6-201ENST00000532553 546 ntTSL 5 BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 FAM223B-202ENST00000598177 713 ntBASIC4.57□□□□□ -1.68
HMCN1Q96RW7 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 FAM223A-202ENST00000625204 713 ntBASIC4.57□□□□□ -1.68
HMCN1Q96RW7 PIGA-209ENST00000634582 965 ntTSL 2 BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 PAX6-247ENST00000638965 979 ntTSL 5 BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 SERPINE3-203ENST00000521255 1439 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 OR7E12P-201ENST00000344740 973 ntBASIC4.57□□□□□ -1.68
HMCN1Q96RW7 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 SSR4P1-201ENST00000415143 412 ntBASIC4.57□□□□□ -1.68
HMCN1Q96RW7 RNA5SP417-201ENST00000516459 108 ntBASIC4.57□□□□□ -1.68
HMCN1Q96RW7 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 AC025419.1-201ENST00000537250 690 ntTSL 3 BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 AP001462.1-201ENST00000594089 452 ntBASIC4.57□□□□□ -1.68
HMCN1Q96RW7 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 KRT18P55-202ENST00000578578 1546 ntBASIC4.57□□□□□ -1.68
HMCN1Q96RW7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 AL391256.1-201ENST00000443260 1855 ntBASIC4.57□□□□□ -1.68
HMCN1Q96RW7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 TSACC-203ENST00000368253 512 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC4.57□□□□□ -1.68
HMCN1Q96RW7 DUTP3-201ENST00000450025 415 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms