Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
BBS4Q96RK4 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.87□□□□□ -0.03
BBS4Q96RK4 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BBS4Q96RK4 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
BBS4Q96RK4 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
BBS4Q96RK4 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
BBS4Q96RK4 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BBS4Q96RK4 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BBS4Q96RK4 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BBS4Q96RK4 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.87□□□□□ -0.03
BBS4Q96RK4 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.87□□□□□ -0.03
BBS4Q96RK4 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.87□□□□□ -0.03
BBS4Q96RK4 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BBS4Q96RK4 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
BBS4Q96RK4 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
BBS4Q96RK4 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
BBS4Q96RK4 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BBS4Q96RK4 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.87□□□□□ -0.03
BBS4Q96RK4 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
BBS4Q96RK4 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
BBS4Q96RK4 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.87□□□□□ -0.03
BBS4Q96RK4 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.87□□□□□ -0.03
BBS4Q96RK4 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BBS4Q96RK4 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
BBS4Q96RK4 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BBS4Q96RK4 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.87□□□□□ -0.03
BBS4Q96RK4 AL645939.2-201ENST00000427340 991 ntBASIC14.87□□□□□ -0.03
BBS4Q96RK4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.87□□□□□ -0.03
BBS4Q96RK4 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.87□□□□□ -0.03
BBS4Q96RK4 AC125807.1-201ENST00000483097 614 ntBASIC14.87□□□□□ -0.03
BBS4Q96RK4 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.87□□□□□ -0.03
BBS4Q96RK4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.87□□□□□ -0.03
BBS4Q96RK4 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
BBS4Q96RK4 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
BBS4Q96RK4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.87□□□□□ -0.03
BBS4Q96RK4 AP001160.2-201ENST00000596071 487 ntBASIC14.87□□□□□ -0.03
BBS4Q96RK4 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
BBS4Q96RK4 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
BBS4Q96RK4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.87□□□□□ -0.03
BBS4Q96RK4 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.87□□□□□ -0.03
BBS4Q96RK4 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.87□□□□□ -0.03
BBS4Q96RK4 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.87□□□□□ -0.03
BBS4Q96RK4 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BBS4Q96RK4 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
BBS4Q96RK4 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.87□□□□□ -0.03
BBS4Q96RK4 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.87□□□□□ -0.03
BBS4Q96RK4 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BBS4Q96RK4 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BBS4Q96RK4 AC009090.5-201ENST00000624886 2285 ntBASIC14.87□□□□□ -0.03
BBS4Q96RK4 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BBS4Q96RK4 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
BBS4Q96RK4 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
BBS4Q96RK4 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
BBS4Q96RK4 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
BBS4Q96RK4 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
BBS4Q96RK4 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BBS4Q96RK4 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.87□□□□□ -0.03
BBS4Q96RK4 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
BBS4Q96RK4 SBF1P1-201ENST00000444527 5631 ntBASIC14.86□□□□□ -0.03
BBS4Q96RK4 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
BBS4Q96RK4 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BBS4Q96RK4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.86□□□□□ -0.03
BBS4Q96RK4 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BBS4Q96RK4 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.86□□□□□ -0.03
BBS4Q96RK4 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.86□□□□□ -0.03
BBS4Q96RK4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
BBS4Q96RK4 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BBS4Q96RK4 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
BBS4Q96RK4 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.86□□□□□ -0.03
BBS4Q96RK4 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
BBS4Q96RK4 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BBS4Q96RK4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BBS4Q96RK4 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.86□□□□□ -0.03
BBS4Q96RK4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
BBS4Q96RK4 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BBS4Q96RK4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
BBS4Q96RK4 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
BBS4Q96RK4 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
BBS4Q96RK4 AL080243.2-201ENST00000418783 582 ntBASIC14.86□□□□□ -0.03
BBS4Q96RK4 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.86□□□□□ -0.03
BBS4Q96RK4 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.86□□□□□ -0.03
BBS4Q96RK4 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.86□□□□□ -0.03
BBS4Q96RK4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BBS4Q96RK4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.86□□□□□ -0.03
BBS4Q96RK4 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.86□□□□□ -0.03
BBS4Q96RK4 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
BBS4Q96RK4 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BBS4Q96RK4 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
BBS4Q96RK4 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BBS4Q96RK4 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
BBS4Q96RK4 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BBS4Q96RK4 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.86□□□□□ -0.03
BBS4Q96RK4 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.86□□□□□ -0.03
BBS4Q96RK4 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
BBS4Q96RK4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
BBS4Q96RK4 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
BBS4Q96RK4 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
BBS4Q96RK4 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.86□□□□□ -0.03
BBS4Q96RK4 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
BBS4Q96RK4 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms