Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 AL162726.2-201ENST00000438986 1017 ntBASIC12.74□□□□□ -0.37
ZNF48Q96MX3 BNIP3P42-201ENST00000454982 569 ntBASIC12.74□□□□□ -0.37
ZNF48Q96MX3 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 AC104989.1-201ENST00000519711 778 ntBASIC12.74□□□□□ -0.37
ZNF48Q96MX3 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 SLC25A47P1-201ENST00000531577 414 ntBASIC12.74□□□□□ -0.37
ZNF48Q96MX3 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 MIR5189-201ENST00000577370 114 ntBASIC12.74□□□□□ -0.37
ZNF48Q96MX3 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 BRI3BPP1-201ENST00000594224 787 ntBASIC12.74□□□□□ -0.37
ZNF48Q96MX3 BNIP3P29-201ENST00000598302 571 ntBASIC12.74□□□□□ -0.37
ZNF48Q96MX3 AC233724.13-201ENST00000598383 410 ntBASIC12.74□□□□□ -0.37
ZNF48Q96MX3 AC011447.5-201ENST00000616168 564 ntBASIC12.74□□□□□ -0.37
ZNF48Q96MX3 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 LINC02199-201ENST00000506655 2702 ntBASIC12.73□□□□□ -0.37
ZNF48Q96MX3 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF48Q96MX3 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms