Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CFAP53Q96M91 CU634019.7-201ENST00000624153 1185 ntBASIC20.82■□□□□ 0.92
CFAP53Q96M91 FP236241.2-201ENST00000624906 1185 ntBASIC20.82■□□□□ 0.92
CFAP53Q96M91 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CFAP53Q96M91 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC20.82■□□□□ 0.92
CFAP53Q96M91 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC20.82■□□□□ 0.92
CFAP53Q96M91 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC20.82■□□□□ 0.92
CFAP53Q96M91 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC20.82■□□□□ 0.92
CFAP53Q96M91 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC20.82■□□□□ 0.92
CFAP53Q96M91 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC20.82■□□□□ 0.92
CFAP53Q96M91 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CFAP53Q96M91 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CFAP53Q96M91 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CFAP53Q96M91 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CFAP53Q96M91 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CFAP53Q96M91 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CFAP53Q96M91 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CFAP53Q96M91 AC063926.2-201ENST00000623766 1308 ntBASIC20.81■□□□□ 0.92
CFAP53Q96M91 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC20.81■□□□□ 0.92
CFAP53Q96M91 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CFAP53Q96M91 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CFAP53Q96M91 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CFAP53Q96M91 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CFAP53Q96M91 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CFAP53Q96M91 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CFAP53Q96M91 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CFAP53Q96M91 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC20.81■□□□□ 0.92
CFAP53Q96M91 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CFAP53Q96M91 NME2-201ENST00000393183 568 ntTSL 2 BASIC20.81■□□□□ 0.92
CFAP53Q96M91 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CFAP53Q96M91 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CFAP53Q96M91 RN7SL837P-201ENST00000463010 287 ntBASIC20.81■□□□□ 0.92
CFAP53Q96M91 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CFAP53Q96M91 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC20.81■□□□□ 0.92
CFAP53Q96M91 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CFAP53Q96M91 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CFAP53Q96M91 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CFAP53Q96M91 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CFAP53Q96M91 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CFAP53Q96M91 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CFAP53Q96M91 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC20.81■□□□□ 0.92
CFAP53Q96M91 AC068587.6-202ENST00000641839 5619 ntBASIC20.81■□□□□ 0.92
CFAP53Q96M91 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CFAP53Q96M91 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CFAP53Q96M91 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CFAP53Q96M91 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC20.8■□□□□ 0.92
CFAP53Q96M91 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC20.8■□□□□ 0.92
CFAP53Q96M91 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CFAP53Q96M91 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CFAP53Q96M91 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CFAP53Q96M91 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CFAP53Q96M91 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC20.8■□□□□ 0.92
CFAP53Q96M91 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CFAP53Q96M91 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CFAP53Q96M91 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
CFAP53Q96M91 AC087481.3-201ENST00000602886 1894 ntBASIC20.8■□□□□ 0.92
CFAP53Q96M91 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CFAP53Q96M91 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC20.8■□□□□ 0.92
CFAP53Q96M91 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CFAP53Q96M91 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CFAP53Q96M91 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC20.8■□□□□ 0.92
CFAP53Q96M91 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CFAP53Q96M91 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CFAP53Q96M91 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
CFAP53Q96M91 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CFAP53Q96M91 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
CFAP53Q96M91 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC20.8■□□□□ 0.92
CFAP53Q96M91 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC20.8■□□□□ 0.92
CFAP53Q96M91 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CFAP53Q96M91 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CFAP53Q96M91 PAUPAR-201ENST00000630360 2965 ntBASIC20.8■□□□□ 0.92
CFAP53Q96M91 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CFAP53Q96M91 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CFAP53Q96M91 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CFAP53Q96M91 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CFAP53Q96M91 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CFAP53Q96M91 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CFAP53Q96M91 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP53Q96M91 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP53Q96M91 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CFAP53Q96M91 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP53Q96M91 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP53Q96M91 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP53Q96M91 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP53Q96M91 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC20.79■□□□□ 0.92
CFAP53Q96M91 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC20.79■□□□□ 0.92
CFAP53Q96M91 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP53Q96M91 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP53Q96M91 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC20.79■□□□□ 0.92
CFAP53Q96M91 GLI4-203ENST00000517468 963 ntTSL 5 BASIC20.79■□□□□ 0.92
CFAP53Q96M91 IGHV3-72-202ENST00000621503 303 ntBASIC20.79■□□□□ 0.92
CFAP53Q96M91 ABBA01031660.1-201ENST00000635219 756 ntBASIC20.79■□□□□ 0.92
CFAP53Q96M91 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC20.79■□□□□ 0.92
CFAP53Q96M91 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP53Q96M91 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP53Q96M91 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP53Q96M91 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP53Q96M91 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC20.79■□□□□ 0.92
CFAP53Q96M91 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP53Q96M91 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms