Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 CLUHP6-201ENST00000580789 941 ntBASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 AC010319.3-201ENST00000597028 470 ntBASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 AC005252.2-201ENST00000624630 1141 ntBASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 SSR4P1-203ENST00000599569 2260 ntBASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 AC105917.1-201ENST00000506637 2539 ntBASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 ACTG1P3-201ENST00000431775 1114 ntBASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 AC007389.4-201ENST00000454674 793 ntBASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 GIMAP3P-201ENST00000495150 836 ntBASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ECHDC3Q96DC8 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms