Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
APH1AQ96BI3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APH1AQ96BI3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
APH1AQ96BI3 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.87□□□□□ -0.19
APH1AQ96BI3 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
APH1AQ96BI3 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APH1AQ96BI3 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APH1AQ96BI3 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APH1AQ96BI3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APH1AQ96BI3 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.86□□□□□ -0.19
APH1AQ96BI3 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
APH1AQ96BI3 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.86□□□□□ -0.19
APH1AQ96BI3 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
APH1AQ96BI3 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.86□□□□□ -0.19
APH1AQ96BI3 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
APH1AQ96BI3 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.86□□□□□ -0.19
APH1AQ96BI3 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.86□□□□□ -0.19
APH1AQ96BI3 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APH1AQ96BI3 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
APH1AQ96BI3 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
APH1AQ96BI3 AL121723.1-201ENST00000445194 1519 ntBASIC13.86□□□□□ -0.19
APH1AQ96BI3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APH1AQ96BI3 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APH1AQ96BI3 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APH1AQ96BI3 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
APH1AQ96BI3 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
APH1AQ96BI3 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APH1AQ96BI3 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APH1AQ96BI3 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
APH1AQ96BI3 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APH1AQ96BI3 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APH1AQ96BI3 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
APH1AQ96BI3 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APH1AQ96BI3 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.86□□□□□ -0.19
APH1AQ96BI3 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APH1AQ96BI3 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.86□□□□□ -0.19
APH1AQ96BI3 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.86□□□□□ -0.19
APH1AQ96BI3 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.86□□□□□ -0.19
APH1AQ96BI3 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.86□□□□□ -0.19
APH1AQ96BI3 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.86□□□□□ -0.19
APH1AQ96BI3 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
APH1AQ96BI3 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.86□□□□□ -0.19
APH1AQ96BI3 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.86□□□□□ -0.19
APH1AQ96BI3 API5-211ENST00000534695 560 ntTSL 5 BASIC13.86□□□□□ -0.19
APH1AQ96BI3 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
APH1AQ96BI3 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.86□□□□□ -0.19
APH1AQ96BI3 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
APH1AQ96BI3 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.86□□□□□ -0.19
APH1AQ96BI3 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
APH1AQ96BI3 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APH1AQ96BI3 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.86□□□□□ -0.19
APH1AQ96BI3 AC007431.3-201ENST00000623221 587 ntBASIC13.86□□□□□ -0.19
APH1AQ96BI3 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APH1AQ96BI3 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.86□□□□□ -0.19
APH1AQ96BI3 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
APH1AQ96BI3 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.86□□□□□ -0.19
APH1AQ96BI3 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
APH1AQ96BI3 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
APH1AQ96BI3 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
APH1AQ96BI3 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APH1AQ96BI3 AC092127.1-201ENST00000567093 3455 ntBASIC13.86□□□□□ -0.19
APH1AQ96BI3 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
APH1AQ96BI3 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.86□□□□□ -0.19
APH1AQ96BI3 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.86□□□□□ -0.19
APH1AQ96BI3 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APH1AQ96BI3 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.86□□□□□ -0.19
APH1AQ96BI3 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
APH1AQ96BI3 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.86□□□□□ -0.19
APH1AQ96BI3 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
APH1AQ96BI3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APH1AQ96BI3 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APH1AQ96BI3 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
APH1AQ96BI3 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APH1AQ96BI3 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.85□□□□□ -0.19
APH1AQ96BI3 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
APH1AQ96BI3 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
APH1AQ96BI3 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.85□□□□□ -0.19
APH1AQ96BI3 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.85□□□□□ -0.19
APH1AQ96BI3 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APH1AQ96BI3 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APH1AQ96BI3 AC127383.1-201ENST00000444697 1800 ntBASIC13.85□□□□□ -0.19
APH1AQ96BI3 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
APH1AQ96BI3 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.85□□□□□ -0.19
APH1AQ96BI3 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.85□□□□□ -0.19
APH1AQ96BI3 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
APH1AQ96BI3 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APH1AQ96BI3 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APH1AQ96BI3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APH1AQ96BI3 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
APH1AQ96BI3 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APH1AQ96BI3 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
APH1AQ96BI3 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APH1AQ96BI3 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
APH1AQ96BI3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
APH1AQ96BI3 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
APH1AQ96BI3 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
APH1AQ96BI3 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
APH1AQ96BI3 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
APH1AQ96BI3 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.85□□□□□ -0.19
APH1AQ96BI3 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms