Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RFT1Q96AA3 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.93□□□□□ -0.18
RFT1Q96AA3 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.93□□□□□ -0.18
RFT1Q96AA3 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.93□□□□□ -0.18
RFT1Q96AA3 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.93□□□□□ -0.18
RFT1Q96AA3 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
RFT1Q96AA3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.93□□□□□ -0.18
RFT1Q96AA3 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RFT1Q96AA3 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFT1Q96AA3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.93□□□□□ -0.18
RFT1Q96AA3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFT1Q96AA3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFT1Q96AA3 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.93□□□□□ -0.18
RFT1Q96AA3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFT1Q96AA3 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC13.93□□□□□ -0.18
RFT1Q96AA3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.93□□□□□ -0.18
RFT1Q96AA3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFT1Q96AA3 AC009078.2-202ENST00000463353 338 ntBASIC13.93□□□□□ -0.18
RFT1Q96AA3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.93□□□□□ -0.18
RFT1Q96AA3 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
RFT1Q96AA3 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.93□□□□□ -0.18
RFT1Q96AA3 SLC25A6P4-201ENST00000586535 553 ntBASIC13.93□□□□□ -0.18
RFT1Q96AA3 Z83851.2-201ENST00000609564 659 ntBASIC13.93□□□□□ -0.18
RFT1Q96AA3 AC007064.4-201ENST00000637740 555 ntBASIC13.93□□□□□ -0.18
RFT1Q96AA3 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.93□□□□□ -0.18
RFT1Q96AA3 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.93□□□□□ -0.18
RFT1Q96AA3 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
RFT1Q96AA3 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.93□□□□□ -0.18
RFT1Q96AA3 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RFT1Q96AA3 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.93□□□□□ -0.18
RFT1Q96AA3 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RFT1Q96AA3 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.93□□□□□ -0.18
RFT1Q96AA3 AC117489.1-201ENST00000625169 3217 ntBASIC13.93□□□□□ -0.18
RFT1Q96AA3 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.93□□□□□ -0.18
RFT1Q96AA3 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
RFT1Q96AA3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.93□□□□□ -0.18
RFT1Q96AA3 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFT1Q96AA3 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFT1Q96AA3 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFT1Q96AA3 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.93□□□□□ -0.18
RFT1Q96AA3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.93□□□□□ -0.18
RFT1Q96AA3 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFT1Q96AA3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFT1Q96AA3 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.93□□□□□ -0.18
RFT1Q96AA3 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFT1Q96AA3 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
RFT1Q96AA3 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RFT1Q96AA3 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RFT1Q96AA3 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.92□□□□□ -0.18
RFT1Q96AA3 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RFT1Q96AA3 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
RFT1Q96AA3 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RFT1Q96AA3 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RFT1Q96AA3 AC011477.6-201ENST00000604980 1927 ntBASIC13.92□□□□□ -0.18
RFT1Q96AA3 AC025580.3-201ENST00000617932 1424 ntBASIC13.92□□□□□ -0.18
RFT1Q96AA3 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RFT1Q96AA3 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RFT1Q96AA3 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RFT1Q96AA3 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.92□□□□□ -0.18
RFT1Q96AA3 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
RFT1Q96AA3 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RFT1Q96AA3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.92□□□□□ -0.18
RFT1Q96AA3 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.92□□□□□ -0.18
RFT1Q96AA3 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RFT1Q96AA3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RFT1Q96AA3 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.92□□□□□ -0.18
RFT1Q96AA3 AC007967.2-201ENST00000432613 625 ntBASIC13.92□□□□□ -0.18
RFT1Q96AA3 RHOQP3-201ENST00000437982 621 ntBASIC13.92□□□□□ -0.18
RFT1Q96AA3 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.92□□□□□ -0.18
RFT1Q96AA3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC13.92□□□□□ -0.18
RFT1Q96AA3 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RFT1Q96AA3 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
RFT1Q96AA3 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.92□□□□□ -0.18
RFT1Q96AA3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RFT1Q96AA3 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.92□□□□□ -0.18
RFT1Q96AA3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RFT1Q96AA3 AQP6-205ENST00000618286 829 ntTSL 5 BASIC13.92□□□□□ -0.18
RFT1Q96AA3 AC004877.2-201ENST00000623941 599 ntBASIC13.92□□□□□ -0.18
RFT1Q96AA3 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RFT1Q96AA3 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RFT1Q96AA3 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RFT1Q96AA3 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.92□□□□□ -0.18
RFT1Q96AA3 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
RFT1Q96AA3 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RFT1Q96AA3 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RFT1Q96AA3 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RFT1Q96AA3 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
RFT1Q96AA3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
RFT1Q96AA3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
RFT1Q96AA3 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RFT1Q96AA3 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RFT1Q96AA3 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
RFT1Q96AA3 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.92□□□□□ -0.18
RFT1Q96AA3 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RFT1Q96AA3 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
RFT1Q96AA3 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RFT1Q96AA3 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.92□□□□□ -0.18
RFT1Q96AA3 AL137784.3-201ENST00000623858 2288 ntBASIC13.92□□□□□ -0.18
RFT1Q96AA3 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RFT1Q96AA3 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms