Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 AC141586.5-201ENST00000624546 2050 ntBASIC13.38□□□□□ -0.27
USP9XQ93008 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
USP9XQ93008 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
USP9XQ93008 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
USP9XQ93008 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
USP9XQ93008 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
USP9XQ93008 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
USP9XQ93008 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.38□□□□□ -0.27
USP9XQ93008 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
USP9XQ93008 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.38□□□□□ -0.27
USP9XQ93008 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC13.38□□□□□ -0.27
USP9XQ93008 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
USP9XQ93008 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
USP9XQ93008 MCC-208ENST00000514701 2855 ntTSL 2 BASIC13.38□□□□□ -0.27
USP9XQ93008 KRT8P14-201ENST00000414254 1442 ntBASIC13.38□□□□□ -0.27
USP9XQ93008 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
USP9XQ93008 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
USP9XQ93008 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
USP9XQ93008 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
USP9XQ93008 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
USP9XQ93008 TPM1-223ENST00000560445 485 ntTSL 3 BASIC13.38□□□□□ -0.27
USP9XQ93008 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC13.38□□□□□ -0.27
USP9XQ93008 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
USP9XQ93008 OR10B1P-201ENST00000601666 907 ntBASIC13.38□□□□□ -0.27
USP9XQ93008 AC021016.3-201ENST00000608367 477 ntBASIC13.38□□□□□ -0.27
USP9XQ93008 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.38□□□□□ -0.27
USP9XQ93008 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
USP9XQ93008 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
USP9XQ93008 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
USP9XQ93008 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
USP9XQ93008 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
USP9XQ93008 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
USP9XQ93008 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.38□□□□□ -0.27
USP9XQ93008 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC13.38□□□□□ -0.27
USP9XQ93008 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
USP9XQ93008 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
USP9XQ93008 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
USP9XQ93008 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC13.38□□□□□ -0.27
USP9XQ93008 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
USP9XQ93008 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
USP9XQ93008 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC13.37□□□□□ -0.27
USP9XQ93008 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
USP9XQ93008 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.37□□□□□ -0.27
USP9XQ93008 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.37□□□□□ -0.27
USP9XQ93008 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC13.37□□□□□ -0.27
USP9XQ93008 BUD31-205ENST00000456893 512 ntTSL 5 BASIC13.37□□□□□ -0.27
USP9XQ93008 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.37□□□□□ -0.27
USP9XQ93008 ALG1L6P-201ENST00000515248 758 ntBASIC13.37□□□□□ -0.27
USP9XQ93008 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
USP9XQ93008 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC13.37□□□□□ -0.27
USP9XQ93008 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC13.37□□□□□ -0.27
USP9XQ93008 HCG18-241ENST00000602290 821 ntTSL 2 BASIC13.37□□□□□ -0.27
USP9XQ93008 AC015912.3-201ENST00000619432 348 ntBASIC13.37□□□□□ -0.27
USP9XQ93008 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
USP9XQ93008 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
USP9XQ93008 AC009093.2-202ENST00000620513 2079 ntBASIC13.37□□□□□ -0.27
USP9XQ93008 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
USP9XQ93008 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
USP9XQ93008 LRRC59-203ENST00000576448 1531 ntBASIC13.37□□□□□ -0.27
USP9XQ93008 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
USP9XQ93008 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
USP9XQ93008 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
USP9XQ93008 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC13.37□□□□□ -0.27
USP9XQ93008 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
USP9XQ93008 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
USP9XQ93008 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
USP9XQ93008 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
USP9XQ93008 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.37□□□□□ -0.27
USP9XQ93008 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
USP9XQ93008 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
USP9XQ93008 AC009779.1-201ENST00000551138 283 ntBASIC13.37□□□□□ -0.27
USP9XQ93008 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
USP9XQ93008 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC13.37□□□□□ -0.27
USP9XQ93008 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
USP9XQ93008 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.37□□□□□ -0.27
USP9XQ93008 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
USP9XQ93008 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
USP9XQ93008 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
USP9XQ93008 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
USP9XQ93008 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
USP9XQ93008 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
USP9XQ93008 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC13.37□□□□□ -0.27
USP9XQ93008 AC015909.3-201ENST00000572855 1794 ntBASIC13.37□□□□□ -0.27
USP9XQ93008 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
USP9XQ93008 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
USP9XQ93008 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC13.36□□□□□ -0.27
USP9XQ93008 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
USP9XQ93008 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.36□□□□□ -0.27
USP9XQ93008 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC13.36□□□□□ -0.27
USP9XQ93008 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC13.36□□□□□ -0.27
USP9XQ93008 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC13.36□□□□□ -0.27
USP9XQ93008 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.36□□□□□ -0.27
USP9XQ93008 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.36□□□□□ -0.27
USP9XQ93008 AC022966.2-201ENST00000587434 367 ntBASIC13.36□□□□□ -0.27
USP9XQ93008 AC008805.1-201ENST00000590892 364 ntBASIC13.36□□□□□ -0.27
USP9XQ93008 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.36□□□□□ -0.27
USP9XQ93008 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
USP9XQ93008 AC005632.3-201ENST00000605544 308 ntBASIC13.36□□□□□ -0.27
USP9XQ93008 AP003680.1-201ENST00000598970 3660 ntBASIC13.36□□□□□ -0.27
USP9XQ93008 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms