Protein–RNA interactions for Protein: Q92616

GCN1, eIF-2-alpha kinase activator GCN1, humanhuman

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1Q92616 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GCN1Q92616 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.2□□□□□ -0.3
GCN1Q92616 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GCN1Q92616 AL360270.3-201ENST00000609118 1348 ntBASIC13.2□□□□□ -0.3
GCN1Q92616 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
GCN1Q92616 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GCN1Q92616 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GCN1Q92616 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GCN1Q92616 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.2□□□□□ -0.3
GCN1Q92616 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.2□□□□□ -0.3
GCN1Q92616 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC13.2□□□□□ -0.3
GCN1Q92616 CASP3-205ENST00000517513 964 ntTSL 5 BASIC13.2□□□□□ -0.3
GCN1Q92616 AC090136.2-201ENST00000517809 420 ntBASIC13.2□□□□□ -0.3
GCN1Q92616 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC13.2□□□□□ -0.3
GCN1Q92616 AC100827.2-201ENST00000563214 1194 ntBASIC13.2□□□□□ -0.3
GCN1Q92616 APOC1-209ENST00000592885 562 ntTSL 3 BASIC13.2□□□□□ -0.3
GCN1Q92616 AC097359.3-201ENST00000603982 1210 ntBASIC13.2□□□□□ -0.3
GCN1Q92616 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC13.2□□□□□ -0.3
GCN1Q92616 PAX6-238ENST00000638755 1161 ntTSL 5 BASIC13.2□□□□□ -0.3
GCN1Q92616 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GCN1Q92616 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC13.2□□□□□ -0.3
GCN1Q92616 AC134407.2-201ENST00000625089 1978 ntBASIC13.2□□□□□ -0.3
GCN1Q92616 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
GCN1Q92616 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GCN1Q92616 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
GCN1Q92616 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GCN1Q92616 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GCN1Q92616 FAM86FP-201ENST00000338711 969 ntBASIC13.19□□□□□ -0.3
GCN1Q92616 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
GCN1Q92616 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.19□□□□□ -0.3
GCN1Q92616 AC092570.1-201ENST00000414446 469 ntBASIC13.19□□□□□ -0.3
GCN1Q92616 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GCN1Q92616 AC012441.2-201ENST00000444843 739 ntBASIC13.19□□□□□ -0.3
GCN1Q92616 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.19□□□□□ -0.3
GCN1Q92616 AP003040.1-201ENST00000532044 1024 ntBASIC13.19□□□□□ -0.3
GCN1Q92616 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.19□□□□□ -0.3
GCN1Q92616 AL357143.1-203ENST00000639750 881 ntBASIC13.19□□□□□ -0.3
GCN1Q92616 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GCN1Q92616 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC13.19□□□□□ -0.3
GCN1Q92616 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GCN1Q92616 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GCN1Q92616 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GCN1Q92616 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GCN1Q92616 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GCN1Q92616 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC13.19□□□□□ -0.3
GCN1Q92616 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC13.19□□□□□ -0.3
GCN1Q92616 AL512599.1-201ENST00000430724 685 ntBASIC13.19□□□□□ -0.3
GCN1Q92616 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GCN1Q92616 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GCN1Q92616 ALG1L3P-201ENST00000503331 765 ntBASIC13.19□□□□□ -0.3
GCN1Q92616 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC13.19□□□□□ -0.3
GCN1Q92616 AC007952.4-201ENST00000573866 637 ntBASIC13.19□□□□□ -0.3
GCN1Q92616 CSTP2-201ENST00000610599 398 ntBASIC13.19□□□□□ -0.3
GCN1Q92616 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GCN1Q92616 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
GCN1Q92616 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC13.19□□□□□ -0.3
GCN1Q92616 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC13.19□□□□□ -0.3
GCN1Q92616 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.19□□□□□ -0.3
GCN1Q92616 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
GCN1Q92616 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
GCN1Q92616 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GCN1Q92616 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
GCN1Q92616 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GCN1Q92616 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
GCN1Q92616 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GCN1Q92616 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.19□□□□□ -0.3
GCN1Q92616 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
GCN1Q92616 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GCN1Q92616 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
GCN1Q92616 SNORA57-201ENST00000383870 149 ntBASIC13.18□□□□□ -0.3
GCN1Q92616 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC13.18□□□□□ -0.3
GCN1Q92616 RNASEH2CP1-201ENST00000454281 502 ntBASIC13.18□□□□□ -0.3
GCN1Q92616 RN7SL363P-201ENST00000482412 273 ntBASIC13.18□□□□□ -0.3
GCN1Q92616 PPIA-208ENST00000489459 907 ntTSL 2 BASIC13.18□□□□□ -0.3
GCN1Q92616 AC022447.5-201ENST00000504817 392 ntBASIC13.18□□□□□ -0.3
GCN1Q92616 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.18□□□□□ -0.3
GCN1Q92616 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.18□□□□□ -0.3
GCN1Q92616 CACNA1C-IT3-201ENST00000542680 622 ntTSL 3 BASIC13.18□□□□□ -0.3
GCN1Q92616 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
GCN1Q92616 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC13.18□□□□□ -0.3
GCN1Q92616 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GCN1Q92616 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
GCN1Q92616 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
GCN1Q92616 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
GCN1Q92616 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC13.18□□□□□ -0.3
GCN1Q92616 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC13.18□□□□□ -0.3
GCN1Q92616 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GCN1Q92616 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC13.18□□□□□ -0.3
GCN1Q92616 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
GCN1Q92616 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
GCN1Q92616 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.18□□□□□ -0.3
GCN1Q92616 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC13.18□□□□□ -0.3
GCN1Q92616 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
GCN1Q92616 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.18□□□□□ -0.3
GCN1Q92616 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
GCN1Q92616 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.18□□□□□ -0.3
GCN1Q92616 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GCN1Q92616 LCE4A-201ENST00000335535 388 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
GCN1Q92616 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GCN1Q92616 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms