Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHC3Q92529 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.64■□□□□ 0.25
SHC3Q92529 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.64■□□□□ 0.25
SHC3Q92529 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHC3Q92529 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SHC3Q92529 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SHC3Q92529 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.63■□□□□ 0.25
SHC3Q92529 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.63■□□□□ 0.25
SHC3Q92529 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHC3Q92529 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SHC3Q92529 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SHC3Q92529 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.63■□□□□ 0.25
SHC3Q92529 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHC3Q92529 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.63■□□□□ 0.25
SHC3Q92529 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SHC3Q92529 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHC3Q92529 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.63■□□□□ 0.25
SHC3Q92529 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHC3Q92529 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHC3Q92529 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SHC3Q92529 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SHC3Q92529 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.63■□□□□ 0.25
SHC3Q92529 PMS2P2-201ENST00000425039 1128 ntBASIC16.63■□□□□ 0.25
SHC3Q92529 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.63■□□□□ 0.25
SHC3Q92529 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.63■□□□□ 0.25
SHC3Q92529 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.63■□□□□ 0.25
SHC3Q92529 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.63■□□□□ 0.25
SHC3Q92529 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHC3Q92529 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
SHC3Q92529 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.63■□□□□ 0.25
SHC3Q92529 TIMM17BP1-201ENST00000545713 516 ntBASIC16.63■□□□□ 0.25
SHC3Q92529 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
SHC3Q92529 SRD5A3P1-201ENST00000603021 949 ntBASIC16.63■□□□□ 0.25
SHC3Q92529 AL158212.4-201ENST00000624062 1286 ntBASIC16.63■□□□□ 0.25
SHC3Q92529 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.63■□□□□ 0.25
SHC3Q92529 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHC3Q92529 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SHC3Q92529 TSPY26P-202ENST00000565928 3884 ntBASIC16.63■□□□□ 0.25
SHC3Q92529 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SHC3Q92529 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.63■□□□□ 0.25
SHC3Q92529 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SHC3Q92529 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SHC3Q92529 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SHC3Q92529 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SHC3Q92529 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SHC3Q92529 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHC3Q92529 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHC3Q92529 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHC3Q92529 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHC3Q92529 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SHC3Q92529 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHC3Q92529 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHC3Q92529 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.62■□□□□ 0.25
SHC3Q92529 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SHC3Q92529 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SHC3Q92529 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SHC3Q92529 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SHC3Q92529 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SHC3Q92529 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHC3Q92529 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.62■□□□□ 0.25
SHC3Q92529 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHC3Q92529 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHC3Q92529 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHC3Q92529 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.62■□□□□ 0.25
SHC3Q92529 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.62■□□□□ 0.25
SHC3Q92529 FAM8A3P-201ENST00000427218 844 ntBASIC16.62■□□□□ 0.25
SHC3Q92529 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SHC3Q92529 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.62■□□□□ 0.25
SHC3Q92529 MEIS3P1-201ENST00000495167 958 ntBASIC16.62■□□□□ 0.25
SHC3Q92529 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
SHC3Q92529 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.62■□□□□ 0.25
SHC3Q92529 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.62■□□□□ 0.25
SHC3Q92529 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.62■□□□□ 0.25
SHC3Q92529 AC135586.1-201ENST00000539323 574 ntBASIC16.62■□□□□ 0.25
SHC3Q92529 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SHC3Q92529 AC004790.1-201ENST00000612686 536 ntBASIC16.62■□□□□ 0.25
SHC3Q92529 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SHC3Q92529 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SHC3Q92529 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHC3Q92529 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHC3Q92529 ZBED1P1-201ENST00000502364 1930 ntBASIC16.62■□□□□ 0.25
SHC3Q92529 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.62■□□□□ 0.25
SHC3Q92529 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHC3Q92529 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SHC3Q92529 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHC3Q92529 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SHC3Q92529 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHC3Q92529 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SHC3Q92529 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SHC3Q92529 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHC3Q92529 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHC3Q92529 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SHC3Q92529 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHC3Q92529 LINC00528-201ENST00000600723 2160 ntBASIC16.61■□□□□ 0.25
SHC3Q92529 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHC3Q92529 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHC3Q92529 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SHC3Q92529 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHC3Q92529 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.61■□□□□ 0.25
SHC3Q92529 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms