Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 KRT8P44-201ENST00000441609 1350 ntBASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 AL138918.1-201ENST00000568306 659 ntBASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 AC027307.2-201ENST00000591252 911 ntBASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 AC232323.1-201ENST00000540724 2099 ntBASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 REXO1L5P-201ENST00000622260 2098 ntBASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 ELL2P1-201ENST00000413990 1906 ntBASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTN4IP1Q8WWV3 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 AL390755.1-201ENST00000623716 2027 ntBASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 BX842568.4-201ENST00000421222 227 ntBASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 TIMM8BP1-201ENST00000452384 211 ntBASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 AC243562.1-201ENST00000560672 389 ntBASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 MIR3687-2-201ENST00000577708 61 ntBASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms