Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGB4Q8WW32 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGB4Q8WW32 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGB4Q8WW32 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGB4Q8WW32 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGB4Q8WW32 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HMGB4Q8WW32 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGB4Q8WW32 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGB4Q8WW32 AC011477.6-201ENST00000604980 1927 ntBASIC15.63■□□□□ 0.09
HMGB4Q8WW32 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HMGB4Q8WW32 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGB4Q8WW32 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGB4Q8WW32 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGB4Q8WW32 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGB4Q8WW32 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGB4Q8WW32 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGB4Q8WW32 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGB4Q8WW32 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HMGB4Q8WW32 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.63■□□□□ 0.09
HMGB4Q8WW32 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
HMGB4Q8WW32 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HMGB4Q8WW32 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.63■□□□□ 0.09
HMGB4Q8WW32 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.63■□□□□ 0.09
HMGB4Q8WW32 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.63■□□□□ 0.09
HMGB4Q8WW32 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.63■□□□□ 0.09
HMGB4Q8WW32 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HMGB4Q8WW32 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.63■□□□□ 0.09
HMGB4Q8WW32 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.63■□□□□ 0.09
HMGB4Q8WW32 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC15.63■□□□□ 0.09
HMGB4Q8WW32 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.63■□□□□ 0.09
HMGB4Q8WW32 AL118508.1-201ENST00000613502 2345 ntBASIC15.63■□□□□ 0.09
HMGB4Q8WW32 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGB4Q8WW32 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.63■□□□□ 0.09
HMGB4Q8WW32 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.63■□□□□ 0.09
HMGB4Q8WW32 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGB4Q8WW32 KRT8P35-201ENST00000483942 1338 ntBASIC15.63■□□□□ 0.09
HMGB4Q8WW32 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGB4Q8WW32 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGB4Q8WW32 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGB4Q8WW32 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.63■□□□□ 0.09
HMGB4Q8WW32 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HMGB4Q8WW32 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGB4Q8WW32 AC092364.2-201ENST00000596710 2692 ntBASIC15.62■□□□□ 0.09
HMGB4Q8WW32 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGB4Q8WW32 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGB4Q8WW32 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HMGB4Q8WW32 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.62■□□□□ 0.09
HMGB4Q8WW32 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
HMGB4Q8WW32 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGB4Q8WW32 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.62■□□□□ 0.09
HMGB4Q8WW32 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HMGB4Q8WW32 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
HMGB4Q8WW32 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGB4Q8WW32 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGB4Q8WW32 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGB4Q8WW32 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGB4Q8WW32 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGB4Q8WW32 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGB4Q8WW32 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HMGB4Q8WW32 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.62■□□□□ 0.09
HMGB4Q8WW32 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HMGB4Q8WW32 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.62■□□□□ 0.09
HMGB4Q8WW32 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.62■□□□□ 0.09
HMGB4Q8WW32 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HMGB4Q8WW32 GOLGA2P4-201ENST00000441462 777 ntBASIC15.62■□□□□ 0.09
HMGB4Q8WW32 Z93015.1-201ENST00000451718 390 ntBASIC15.62■□□□□ 0.09
HMGB4Q8WW32 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HMGB4Q8WW32 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.62■□□□□ 0.09
HMGB4Q8WW32 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGB4Q8WW32 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HMGB4Q8WW32 C2orf69P2-201ENST00000562032 1123 ntBASIC15.62■□□□□ 0.09
HMGB4Q8WW32 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.62■□□□□ 0.09
HMGB4Q8WW32 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.62■□□□□ 0.09
HMGB4Q8WW32 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HMGB4Q8WW32 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HMGB4Q8WW32 MIR4741-201ENST00000579822 90 ntBASIC15.62■□□□□ 0.09
HMGB4Q8WW32 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.62■□□□□ 0.09
HMGB4Q8WW32 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HMGB4Q8WW32 AL138799.1-201ENST00000448213 1675 ntBASIC15.62■□□□□ 0.09
HMGB4Q8WW32 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGB4Q8WW32 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.62■□□□□ 0.09
HMGB4Q8WW32 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGB4Q8WW32 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.62■□□□□ 0.09
HMGB4Q8WW32 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGB4Q8WW32 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGB4Q8WW32 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGB4Q8WW32 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HMGB4Q8WW32 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HMGB4Q8WW32 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.62■□□□□ 0.09
HMGB4Q8WW32 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.61■□□□□ 0.09
HMGB4Q8WW32 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.61■□□□□ 0.09
HMGB4Q8WW32 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HMGB4Q8WW32 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.61■□□□□ 0.09
HMGB4Q8WW32 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HMGB4Q8WW32 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HMGB4Q8WW32 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGB4Q8WW32 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.61■□□□□ 0.09
HMGB4Q8WW32 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGB4Q8WW32 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HMGB4Q8WW32 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms