Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 AL603832.2-201ENST00000566195 2125 ntBASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 AC097359.3-201ENST00000603982 1210 ntBASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 AC012645.4-201ENST00000610691 1061 ntBASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.12□□□□□ -0.15
FNDC9Q8TBE3 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 KRT18P64-201ENST00000434946 1219 ntBASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 RN7SL692P-201ENST00000464677 288 ntBASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 SLED1-202ENST00000512051 380 ntBASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 AC008494.3-201ENST00000606615 944 ntBASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 AC007431.3-201ENST00000623221 587 ntBASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FNDC9Q8TBE3 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms