Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.54■□□□□ 0.24
UBA3Q8TBC4 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.54■□□□□ 0.24
UBA3Q8TBC4 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.54■□□□□ 0.24
UBA3Q8TBC4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.54■□□□□ 0.24
UBA3Q8TBC4 RARRES2P5-201ENST00000564013 466 ntBASIC16.54■□□□□ 0.24
UBA3Q8TBC4 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.54■□□□□ 0.24
UBA3Q8TBC4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.54■□□□□ 0.24
UBA3Q8TBC4 AL132655.2-201ENST00000596276 594 ntBASIC16.54■□□□□ 0.24
UBA3Q8TBC4 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBA3Q8TBC4 AL391069.4-201ENST00000609583 481 ntBASIC16.54■□□□□ 0.24
UBA3Q8TBC4 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
UBA3Q8TBC4 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBA3Q8TBC4 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.54■□□□□ 0.24
UBA3Q8TBC4 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBA3Q8TBC4 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.54■□□□□ 0.24
UBA3Q8TBC4 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UBA3Q8TBC4 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBA3Q8TBC4 AC013268.4-201ENST00000637413 2228 ntBASIC16.54■□□□□ 0.24
UBA3Q8TBC4 FLJ16779-201ENST00000612722 7638 ntBASIC16.54■□□□□ 0.24
UBA3Q8TBC4 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UBA3Q8TBC4 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.54■□□□□ 0.24
UBA3Q8TBC4 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
UBA3Q8TBC4 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UBA3Q8TBC4 LINC00554-201ENST00000564841 3011 ntBASIC16.54■□□□□ 0.24
UBA3Q8TBC4 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 AC084364.1-201ENST00000551967 1556 ntBASIC16.53■□□□□ 0.24
UBA3Q8TBC4 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 AL133267.1-201ENST00000398220 340 ntBASIC16.53■□□□□ 0.24
UBA3Q8TBC4 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 KRT18P43-201ENST00000469825 1281 ntBASIC16.53■□□□□ 0.24
UBA3Q8TBC4 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 CHCHD2P3-201ENST00000603038 451 ntBASIC16.53■□□□□ 0.24
UBA3Q8TBC4 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.53■□□□□ 0.24
UBA3Q8TBC4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 MIR8072-201ENST00000614241 80 ntBASIC16.53■□□□□ 0.24
UBA3Q8TBC4 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.53■□□□□ 0.24
UBA3Q8TBC4 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBA3Q8TBC4 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
UBA3Q8TBC4 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
UBA3Q8TBC4 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
UBA3Q8TBC4 SLC7A15P-201ENST00000424028 1363 ntBASIC16.52■□□□□ 0.24
UBA3Q8TBC4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
UBA3Q8TBC4 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.52■□□□□ 0.24
UBA3Q8TBC4 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
UBA3Q8TBC4 AP002414.2-201ENST00000591780 3365 ntBASIC16.52■□□□□ 0.24
UBA3Q8TBC4 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
UBA3Q8TBC4 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.52■□□□□ 0.24
UBA3Q8TBC4 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
UBA3Q8TBC4 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
UBA3Q8TBC4 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.52■□□□□ 0.24
UBA3Q8TBC4 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
UBA3Q8TBC4 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
UBA3Q8TBC4 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
UBA3Q8TBC4 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.52■□□□□ 0.24
UBA3Q8TBC4 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.52■□□□□ 0.24
UBA3Q8TBC4 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.52■□□□□ 0.24
UBA3Q8TBC4 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
UBA3Q8TBC4 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
UBA3Q8TBC4 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
UBA3Q8TBC4 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms