Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 LINC01482-201ENST00000585484 2616 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SVIPQ8NHG7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 FUK-202ENST00000378912 3925 ntTSL 2 BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 TRIM40-206ENST00000376724 2006 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 ELMOD3-201ENST00000315658 2685 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 LINC01721-201ENST00000457274 2376 ntTSL 2 BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 EPHB6-211ENST00000619012 4011 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 MMP2-208ENST00000570308 3235 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 MROH4P-201ENST00000431302 1578 ntBASIC9.51□□□□□ -0.89
SVIPQ8NHG7 FCRLA-214ENST00000546024 2077 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 SERPINE2-203ENST00000409840 2569 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 AL021392.1-201ENST00000426112 2949 ntTSL 2 BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 IGSF9-201ENST00000361509 3996 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 AC074019.1-201ENST00000428788 1096 ntBASIC9.51□□□□□ -0.89
SVIPQ8NHG7 AC079140.1-201ENST00000508039 487 ntBASIC9.51□□□□□ -0.89
SVIPQ8NHG7 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 PSMA3-AS1-208ENST00000555275 903 ntTSL 2 BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 AC104564.6-201ENST00000582881 1052 ntBASIC9.51□□□□□ -0.89
SVIPQ8NHG7 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 CSF2RA-204ENST00000381509 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 DCLK2-202ENST00000302176 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 AC048380.2-201ENST00000624725 3548 ntBASIC9.51□□□□□ -0.89
SVIPQ8NHG7 PDIA6-208ENST00000617249 2344 ntTSL 5 BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 CIT-203ENST00000392521 8708 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 SYPL2-201ENST00000369872 3624 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 RBM12-202ENST00000374104 5213 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 PUS7L-202ENST00000416848 4364 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 AC093677.2-201ENST00000600169 1863 ntBASIC9.51□□□□□ -0.89
SVIPQ8NHG7 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 MYO10-210ENST00000513610 8038 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 PIK3CD-201ENST00000361110 3508 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 PIK3CD-207ENST00000543390 3503 ntTSL 5 BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 TCF4-241ENST00000568740 2628 ntTSL 5 BASIC9.51□□□□□ -0.89
SVIPQ8NHG7 FAM153B-201ENST00000253490 1913 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 TMEM215-201ENST00000342743 3581 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 CCDC32-214ENST00000561011 1577 ntTSL 2 BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 HSPA8-218ENST00000532636 2306 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 ATP8B2-202ENST00000368489 5861 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 LILRA2-204ENST00000391738 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 ARRDC3-AS1-201ENST00000625713 2500 ntTSL 2 BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 UNC45A-201ENST00000394275 4002 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 PCDHGA6-201ENST00000517434 4775 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 JUP-203ENST00000393931 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 RNF217-210ENST00000521654 11325 ntAPPRIS P2 TSL 2 BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 ZC3HAV1-201ENST00000242351 7100 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 CASP8-208ENST00000392266 1283 ntTSL 2 BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 AC027644.3-201ENST00000607978 557 ntBASIC9.5□□□□□ -0.89
SVIPQ8NHG7 AC025268.1-201ENST00000632192 1199 ntBASIC9.5□□□□□ -0.89
SVIPQ8NHG7 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 APOL2-201ENST00000249066 2685 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 PGGHG-203ENST00000409548 3687 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 IL4R-203ENST00000543915 3539 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 PRSS51-204ENST00000637190 2149 ntTSL 5 BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 REXO1L4P-201ENST00000605109 1937 ntBASIC9.5□□□□□ -0.89
SVIPQ8NHG7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 YWHAG-201ENST00000307630 3750 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 COX15-201ENST00000016171 2356 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 GBA-201ENST00000327247 2387 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms