Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 KRT18P28-201ENST00000453838 1332 ntBASIC14.66□□□□□ -0.06
NUP43Q8NFH3 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 AC006058.4-201ENST00000624016 1670 ntBASIC14.65□□□□□ -0.06
NUP43Q8NFH3 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 TREML5P-201ENST00000421694 576 ntBASIC14.65□□□□□ -0.06
NUP43Q8NFH3 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 AC010336.2-201ENST00000564226 506 ntBASIC14.65□□□□□ -0.06
NUP43Q8NFH3 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 MIR600HG-201ENST00000449175 5984 ntBASIC14.65□□□□□ -0.06
NUP43Q8NFH3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 AC148477.4-201ENST00000613430 1793 ntBASIC14.65□□□□□ -0.06
NUP43Q8NFH3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
NUP43Q8NFH3 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
NUP43Q8NFH3 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
NUP43Q8NFH3 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NUP43Q8NFH3 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.64□□□□□ -0.07
NUP43Q8NFH3 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NUP43Q8NFH3 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.64□□□□□ -0.07
NUP43Q8NFH3 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NUP43Q8NFH3 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
NUP43Q8NFH3 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
NUP43Q8NFH3 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.64□□□□□ -0.07
NUP43Q8NFH3 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.64□□□□□ -0.07
NUP43Q8NFH3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.64□□□□□ -0.07
NUP43Q8NFH3 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NUP43Q8NFH3 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NUP43Q8NFH3 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NUP43Q8NFH3 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NUP43Q8NFH3 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
NUP43Q8NFH3 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
NUP43Q8NFH3 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NUP43Q8NFH3 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.64□□□□□ -0.07
NUP43Q8NFH3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NUP43Q8NFH3 AC097493.3-201ENST00000509725 367 ntBASIC14.64□□□□□ -0.07
NUP43Q8NFH3 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.64□□□□□ -0.07
NUP43Q8NFH3 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
NUP43Q8NFH3 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.64□□□□□ -0.07
NUP43Q8NFH3 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.64□□□□□ -0.07
NUP43Q8NFH3 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.64□□□□□ -0.07
NUP43Q8NFH3 AL158211.3-201ENST00000607385 239 ntBASIC14.64□□□□□ -0.07
NUP43Q8NFH3 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.64□□□□□ -0.07
NUP43Q8NFH3 AF228730.6-201ENST00000641497 218 ntBASIC14.64□□□□□ -0.07
NUP43Q8NFH3 AC084121.3-201ENST00000641716 218 ntBASIC14.64□□□□□ -0.07
NUP43Q8NFH3 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.64□□□□□ -0.07
NUP43Q8NFH3 AC103702.1-201ENST00000548801 2630 ntBASIC14.64□□□□□ -0.07
NUP43Q8NFH3 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms