Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LSMEM1Q8N8F7 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.38□□□□□ -0.11
LSMEM1Q8N8F7 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
LSMEM1Q8N8F7 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.38□□□□□ -0.11
LSMEM1Q8N8F7 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LSMEM1Q8N8F7 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LSMEM1Q8N8F7 AC005089.1-201ENST00000619486 2241 ntBASIC14.38□□□□□ -0.11
LSMEM1Q8N8F7 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LSMEM1Q8N8F7 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LSMEM1Q8N8F7 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.38□□□□□ -0.11
LSMEM1Q8N8F7 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LSMEM1Q8N8F7 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LSMEM1Q8N8F7 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LSMEM1Q8N8F7 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LSMEM1Q8N8F7 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LSMEM1Q8N8F7 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LSMEM1Q8N8F7 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 RPL5P21-201ENST00000404620 815 ntBASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 HLA-J-203ENST00000494367 1087 ntBASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 MIR6069-201ENST00000620069 79 ntBASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 AC134684.3-201ENST00000641758 218 ntBASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.37□□□□□ -0.11
LSMEM1Q8N8F7 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 CETN4P-206ENST00000642099 2168 ntBASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 TARDBPP1-201ENST00000442013 1203 ntBASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 AC004967.1-201ENST00000453589 447 ntBASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms