Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.57■□□□□ 0.24
NPAS4Q8IUM7 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS4Q8IUM7 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS4Q8IUM7 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS4Q8IUM7 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.57■□□□□ 0.24
NPAS4Q8IUM7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS4Q8IUM7 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS4Q8IUM7 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.57■□□□□ 0.24
NPAS4Q8IUM7 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS4Q8IUM7 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS4Q8IUM7 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.57■□□□□ 0.24
NPAS4Q8IUM7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
NPAS4Q8IUM7 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.57■□□□□ 0.24
NPAS4Q8IUM7 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS4Q8IUM7 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS4Q8IUM7 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.57■□□□□ 0.24
NPAS4Q8IUM7 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.57■□□□□ 0.24
NPAS4Q8IUM7 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS4Q8IUM7 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS4Q8IUM7 AC005077.2-201ENST00000449786 690 ntBASIC16.57■□□□□ 0.24
NPAS4Q8IUM7 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC16.57■□□□□ 0.24
NPAS4Q8IUM7 COX5BP1-201ENST00000507622 393 ntBASIC16.57■□□□□ 0.24
NPAS4Q8IUM7 PARP8-218ENST00000513738 596 ntTSL 4 BASIC16.57■□□□□ 0.24
NPAS4Q8IUM7 RNA5SP423-201ENST00000517127 109 ntBASIC16.57■□□□□ 0.24
NPAS4Q8IUM7 AC126915.1-201ENST00000522847 1038 ntBASIC16.57■□□□□ 0.24
NPAS4Q8IUM7 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.57■□□□□ 0.24
NPAS4Q8IUM7 NKG7-204ENST00000595217 816 ntTSL 2 BASIC16.57■□□□□ 0.24
NPAS4Q8IUM7 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC16.57■□□□□ 0.24
NPAS4Q8IUM7 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS4Q8IUM7 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.57■□□□□ 0.24
NPAS4Q8IUM7 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
NPAS4Q8IUM7 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
NPAS4Q8IUM7 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS4Q8IUM7 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS4Q8IUM7 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS4Q8IUM7 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS4Q8IUM7 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.57■□□□□ 0.24
NPAS4Q8IUM7 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
NPAS4Q8IUM7 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.57■□□□□ 0.24
NPAS4Q8IUM7 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.57■□□□□ 0.24
NPAS4Q8IUM7 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS4Q8IUM7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS4Q8IUM7 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS4Q8IUM7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
NPAS4Q8IUM7 AC084364.1-201ENST00000551967 1556 ntBASIC16.56■□□□□ 0.24
NPAS4Q8IUM7 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS4Q8IUM7 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.56■□□□□ 0.24
NPAS4Q8IUM7 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS4Q8IUM7 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.56■□□□□ 0.24
NPAS4Q8IUM7 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
NPAS4Q8IUM7 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS4Q8IUM7 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS4Q8IUM7 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.56■□□□□ 0.24
NPAS4Q8IUM7 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS4Q8IUM7 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.56■□□□□ 0.24
NPAS4Q8IUM7 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS4Q8IUM7 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS4Q8IUM7 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.56■□□□□ 0.24
NPAS4Q8IUM7 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS4Q8IUM7 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.56■□□□□ 0.24
NPAS4Q8IUM7 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS4Q8IUM7 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
NPAS4Q8IUM7 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.56■□□□□ 0.24
NPAS4Q8IUM7 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.56■□□□□ 0.24
NPAS4Q8IUM7 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC16.56■□□□□ 0.24
NPAS4Q8IUM7 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS4Q8IUM7 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS4Q8IUM7 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC16.56■□□□□ 0.24
NPAS4Q8IUM7 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.56■□□□□ 0.24
NPAS4Q8IUM7 AL645728.2-202ENST00000641679 227 ntBASIC16.56■□□□□ 0.24
NPAS4Q8IUM7 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS4Q8IUM7 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
NPAS4Q8IUM7 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS4Q8IUM7 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
NPAS4Q8IUM7 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
NPAS4Q8IUM7 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS4Q8IUM7 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
NPAS4Q8IUM7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS4Q8IUM7 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS4Q8IUM7 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS4Q8IUM7 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS4Q8IUM7 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.55■□□□□ 0.24
NPAS4Q8IUM7 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.55■□□□□ 0.24
NPAS4Q8IUM7 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.55■□□□□ 0.24
NPAS4Q8IUM7 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NPAS4Q8IUM7 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NPAS4Q8IUM7 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NPAS4Q8IUM7 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
NPAS4Q8IUM7 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.55■□□□□ 0.24
NPAS4Q8IUM7 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
NPAS4Q8IUM7 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPAS4Q8IUM7 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NPAS4Q8IUM7 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
NPAS4Q8IUM7 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NPAS4Q8IUM7 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
NPAS4Q8IUM7 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.55■□□□□ 0.24
NPAS4Q8IUM7 EIF3FP3-201ENST00000434851 1086 ntBASIC16.55■□□□□ 0.24
NPAS4Q8IUM7 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.55■□□□□ 0.24
NPAS4Q8IUM7 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.55■□□□□ 0.24
NPAS4Q8IUM7 HIST2H2BC-201ENST00000498492 580 ntBASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms