Protein–RNA interactions for Protein: Q86WV1

SKAP1, Src kinase-associated phosphoprotein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP1Q86WV1 TPM4P1-201ENST00000436100 807 ntBASIC19.52■□□□□ 0.72
SKAP1Q86WV1 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.52■□□□□ 0.72
SKAP1Q86WV1 AL139010.1-201ENST00000454878 894 ntBASIC19.52■□□□□ 0.72
SKAP1Q86WV1 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SKAP1Q86WV1 PGAM5P1-201ENST00000518923 814 ntBASIC19.52■□□□□ 0.72
SKAP1Q86WV1 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.52■□□□□ 0.72
SKAP1Q86WV1 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC19.52■□□□□ 0.72
SKAP1Q86WV1 AC093520.2-201ENST00000561830 333 ntBASIC19.52■□□□□ 0.72
SKAP1Q86WV1 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.52■□□□□ 0.72
SKAP1Q86WV1 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.52■□□□□ 0.72
SKAP1Q86WV1 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SKAP1Q86WV1 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
SKAP1Q86WV1 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SKAP1Q86WV1 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SKAP1Q86WV1 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SKAP1Q86WV1 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SKAP1Q86WV1 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SKAP1Q86WV1 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SKAP1Q86WV1 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 GRN-214ENST00000589265 1632 ntTSL 5 BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 AC136604.1-201ENST00000418535 575 ntBASIC19.51■□□□□ 0.71
SKAP1Q86WV1 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 RARRES2P9-201ENST00000565168 469 ntBASIC19.51■□□□□ 0.71
SKAP1Q86WV1 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 MROH4P-201ENST00000431302 1578 ntBASIC19.51■□□□□ 0.71
SKAP1Q86WV1 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SKAP1Q86WV1 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC19.5■□□□□ 0.71
SKAP1Q86WV1 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SKAP1Q86WV1 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SKAP1Q86WV1 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC19.5■□□□□ 0.71
SKAP1Q86WV1 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SKAP1Q86WV1 CNTNAP3P2-201ENST00000617175 3861 ntBASIC19.5■□□□□ 0.71
SKAP1Q86WV1 AC084364.1-201ENST00000551967 1556 ntBASIC19.5■□□□□ 0.71
SKAP1Q86WV1 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SKAP1Q86WV1 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SKAP1Q86WV1 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC19.5■□□□□ 0.71
SKAP1Q86WV1 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
SKAP1Q86WV1 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SKAP1Q86WV1 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.5■□□□□ 0.71
SKAP1Q86WV1 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SKAP1Q86WV1 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.5■□□□□ 0.71
SKAP1Q86WV1 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC19.5■□□□□ 0.71
SKAP1Q86WV1 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
SKAP1Q86WV1 FAM197Y3-203ENST00000618346 717 ntBASIC19.5■□□□□ 0.71
SKAP1Q86WV1 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SKAP1Q86WV1 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC19.5■□□□□ 0.71
SKAP1Q86WV1 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SKAP1Q86WV1 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SKAP1Q86WV1 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
SKAP1Q86WV1 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SKAP1Q86WV1 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SKAP1Q86WV1 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SKAP1Q86WV1 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SKAP1Q86WV1 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SKAP1Q86WV1 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SKAP1Q86WV1 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
SKAP1Q86WV1 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SKAP1Q86WV1 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms