Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 KRT17P7-201ENST00000451704 1104 ntBASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 AL035252.4-201ENST00000624174 288 ntBASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 AL033527.5-201ENST00000641382 801 ntBASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 AL162727.3-201ENST00000635661 2787 ntBASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 SOCS2P1-201ENST00000417727 557 ntBASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 AL162726.2-201ENST00000438986 1017 ntBASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 GAPDHP21-201ENST00000450301 1010 ntBASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 AC105250.1-201ENST00000509378 2057 ntBASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 AC084364.1-201ENST00000551967 1556 ntBASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 AL359711.2-201ENST00000563105 872 ntBASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 AC120045.2-201ENST00000567334 178 ntBASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 AC063926.2-201ENST00000623766 1308 ntBASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LRRTM4Q86VH4 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms