Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 REXO1L2P-201ENST00000425429 2069 ntBASIC12.85□□□□□ -0.35
CSMD2Q7Z408 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.84□□□□□ -0.35
CSMD2Q7Z408 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD2Q7Z408 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD2Q7Z408 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.84□□□□□ -0.35
CSMD2Q7Z408 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
CSMD2Q7Z408 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD2Q7Z408 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD2Q7Z408 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD2Q7Z408 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.84□□□□□ -0.35
CSMD2Q7Z408 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD2Q7Z408 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC12.84□□□□□ -0.35
CSMD2Q7Z408 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC12.84□□□□□ -0.35
CSMD2Q7Z408 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC12.84□□□□□ -0.35
CSMD2Q7Z408 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.84□□□□□ -0.35
CSMD2Q7Z408 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CSMD2Q7Z408 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC12.84□□□□□ -0.35
CSMD2Q7Z408 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC12.84□□□□□ -0.35
CSMD2Q7Z408 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD2Q7Z408 AC006449.5-201ENST00000610658 2098 ntBASIC12.84□□□□□ -0.35
CSMD2Q7Z408 LRRC59-203ENST00000576448 1531 ntBASIC12.84□□□□□ -0.35
CSMD2Q7Z408 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD2Q7Z408 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD2Q7Z408 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC12.84□□□□□ -0.35
CSMD2Q7Z408 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC12.84□□□□□ -0.35
CSMD2Q7Z408 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD2Q7Z408 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD2Q7Z408 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD2Q7Z408 RN7SL396P-201ENST00000471086 295 ntBASIC12.84□□□□□ -0.35
CSMD2Q7Z408 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC12.84□□□□□ -0.35
CSMD2Q7Z408 AL358472.3-201ENST00000608147 415 ntBASIC12.84□□□□□ -0.35
CSMD2Q7Z408 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD2Q7Z408 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.84□□□□□ -0.35
CSMD2Q7Z408 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
CSMD2Q7Z408 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CSMD2Q7Z408 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD2Q7Z408 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CSMD2Q7Z408 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD2Q7Z408 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD2Q7Z408 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD2Q7Z408 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD2Q7Z408 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
CSMD2Q7Z408 MIR557-201ENST00000385239 98 ntBASIC12.83□□□□□ -0.35
CSMD2Q7Z408 EIF3FP3-201ENST00000434851 1086 ntBASIC12.83□□□□□ -0.35
CSMD2Q7Z408 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CSMD2Q7Z408 AC130709.1-201ENST00000484779 1212 ntBASIC12.83□□□□□ -0.35
CSMD2Q7Z408 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.83□□□□□ -0.35
CSMD2Q7Z408 AC026803.1-201ENST00000569130 274 ntBASIC12.83□□□□□ -0.35
CSMD2Q7Z408 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC12.83□□□□□ -0.35
CSMD2Q7Z408 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CSMD2Q7Z408 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
CSMD2Q7Z408 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
CSMD2Q7Z408 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
CSMD2Q7Z408 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSMD2Q7Z408 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CSMD2Q7Z408 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC12.83□□□□□ -0.36
CSMD2Q7Z408 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSMD2Q7Z408 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSMD2Q7Z408 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSMD2Q7Z408 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CSMD2Q7Z408 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC12.83□□□□□ -0.36
CSMD2Q7Z408 HCG27-204ENST00000424675 895 ntTSL 3 BASIC12.83□□□□□ -0.36
CSMD2Q7Z408 FAM86KP-201ENST00000509817 987 ntBASIC12.83□□□□□ -0.36
CSMD2Q7Z408 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC12.83□□□□□ -0.36
CSMD2Q7Z408 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC12.83□□□□□ -0.36
CSMD2Q7Z408 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSMD2Q7Z408 DDX5-235ENST00000630471 473 ntTSL 4 BASIC12.83□□□□□ -0.36
CSMD2Q7Z408 WT1-209ENST00000530998 2421 ntTSL 2 BASIC12.83□□□□□ -0.36
CSMD2Q7Z408 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSMD2Q7Z408 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.83□□□□□ -0.36
CSMD2Q7Z408 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CSMD2Q7Z408 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC12.83□□□□□ -0.36
CSMD2Q7Z408 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSMD2Q7Z408 PCDHB19P-201ENST00000570871 2371 ntBASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms