Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SHFQ7M4L6 AC005912.2-201ENST00000619492 2400 ntBASIC14.21□□□□□ -0.13
SHFQ7M4L6 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SHFQ7M4L6 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
SHFQ7M4L6 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.21□□□□□ -0.13
SHFQ7M4L6 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SHFQ7M4L6 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SHFQ7M4L6 AL390755.1-201ENST00000623716 2027 ntBASIC14.21□□□□□ -0.13
SHFQ7M4L6 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
SHFQ7M4L6 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.21□□□□□ -0.13
SHFQ7M4L6 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.21□□□□□ -0.13
SHFQ7M4L6 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SHFQ7M4L6 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SHFQ7M4L6 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.21□□□□□ -0.13
SHFQ7M4L6 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.21□□□□□ -0.13
SHFQ7M4L6 AC007967.2-201ENST00000432613 625 ntBASIC14.21□□□□□ -0.13
SHFQ7M4L6 KRT18P2-201ENST00000447938 1258 ntBASIC14.21□□□□□ -0.13
SHFQ7M4L6 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.21□□□□□ -0.13
SHFQ7M4L6 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.21□□□□□ -0.13
SHFQ7M4L6 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.21□□□□□ -0.13
SHFQ7M4L6 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.21□□□□□ -0.13
SHFQ7M4L6 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.21□□□□□ -0.13
SHFQ7M4L6 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.21□□□□□ -0.13
SHFQ7M4L6 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.21□□□□□ -0.13
SHFQ7M4L6 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.21□□□□□ -0.13
SHFQ7M4L6 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
SHFQ7M4L6 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SHFQ7M4L6 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SHFQ7M4L6 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
SHFQ7M4L6 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SHFQ7M4L6 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.21□□□□□ -0.13
SHFQ7M4L6 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SHFQ7M4L6 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SHFQ7M4L6 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
SHFQ7M4L6 CICP4-201ENST00000447359 2812 ntBASIC14.21□□□□□ -0.14
SHFQ7M4L6 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
SHFQ7M4L6 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SHFQ7M4L6 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.21□□□□□ -0.14
SHFQ7M4L6 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
SHFQ7M4L6 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
SHFQ7M4L6 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.21□□□□□ -0.14
SHFQ7M4L6 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.21□□□□□ -0.14
SHFQ7M4L6 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
SHFQ7M4L6 AC015656.1-201ENST00000624209 3578 ntBASIC14.21□□□□□ -0.14
SHFQ7M4L6 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.2□□□□□ -0.14
SHFQ7M4L6 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHFQ7M4L6 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHFQ7M4L6 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHFQ7M4L6 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHFQ7M4L6 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHFQ7M4L6 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.2□□□□□ -0.14
SHFQ7M4L6 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.2□□□□□ -0.14
SHFQ7M4L6 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SHFQ7M4L6 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SHFQ7M4L6 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHFQ7M4L6 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.2□□□□□ -0.14
SHFQ7M4L6 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.2□□□□□ -0.14
SHFQ7M4L6 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHFQ7M4L6 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHFQ7M4L6 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SHFQ7M4L6 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHFQ7M4L6 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHFQ7M4L6 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHFQ7M4L6 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.2□□□□□ -0.14
SHFQ7M4L6 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SHFQ7M4L6 RNA5SP416-201ENST00000516838 111 ntBASIC14.2□□□□□ -0.14
SHFQ7M4L6 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.2□□□□□ -0.14
SHFQ7M4L6 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.2□□□□□ -0.14
SHFQ7M4L6 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.2□□□□□ -0.14
SHFQ7M4L6 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.2□□□□□ -0.14
SHFQ7M4L6 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.2□□□□□ -0.14
SHFQ7M4L6 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHFQ7M4L6 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SHFQ7M4L6 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SHFQ7M4L6 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHFQ7M4L6 AL691432.1-201ENST00000596308 1422 ntBASIC14.2□□□□□ -0.14
SHFQ7M4L6 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHFQ7M4L6 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.2□□□□□ -0.14
SHFQ7M4L6 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHFQ7M4L6 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.2□□□□□ -0.14
SHFQ7M4L6 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
SHFQ7M4L6 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.2□□□□□ -0.14
SHFQ7M4L6 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHFQ7M4L6 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.2□□□□□ -0.14
SHFQ7M4L6 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHFQ7M4L6 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SHFQ7M4L6 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SHFQ7M4L6 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.2□□□□□ -0.14
SHFQ7M4L6 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SHFQ7M4L6 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SHFQ7M4L6 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHFQ7M4L6 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SHFQ7M4L6 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHFQ7M4L6 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SHFQ7M4L6 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SHFQ7M4L6 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.19□□□□□ -0.14
SHFQ7M4L6 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SHFQ7M4L6 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHFQ7M4L6 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SHFQ7M4L6 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms