Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAPH1Q70E73 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAPH1Q70E73 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.8■□□□□ 0.12
RAPH1Q70E73 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.8■□□□□ 0.12
RAPH1Q70E73 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAPH1Q70E73 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAPH1Q70E73 HLA-H-201ENST00000383620 1096 ntBASIC15.8■□□□□ 0.12
RAPH1Q70E73 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
RAPH1Q70E73 MIR940-201ENST00000401276 94 ntBASIC15.8■□□□□ 0.12
RAPH1Q70E73 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.8■□□□□ 0.12
RAPH1Q70E73 AL139010.1-201ENST00000454878 894 ntBASIC15.8■□□□□ 0.12
RAPH1Q70E73 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.8■□□□□ 0.12
RAPH1Q70E73 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.8■□□□□ 0.12
RAPH1Q70E73 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.8■□□□□ 0.12
RAPH1Q70E73 AP000842.3-202ENST00000569238 1080 ntBASIC15.8■□□□□ 0.12
RAPH1Q70E73 AC026120.1-201ENST00000611536 926 ntBASIC15.8■□□□□ 0.12
RAPH1Q70E73 AC092902.6-201ENST00000641783 218 ntBASIC15.8■□□□□ 0.12
RAPH1Q70E73 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.8■□□□□ 0.12
RAPH1Q70E73 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RAPH1Q70E73 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAPH1Q70E73 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAPH1Q70E73 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RAPH1Q70E73 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAPH1Q70E73 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAPH1Q70E73 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RAPH1Q70E73 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RAPH1Q70E73 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAPH1Q70E73 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
RAPH1Q70E73 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RAPH1Q70E73 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.8■□□□□ 0.12
RAPH1Q70E73 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAPH1Q70E73 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RAPH1Q70E73 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RAPH1Q70E73 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.79■□□□□ 0.12
RAPH1Q70E73 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAPH1Q70E73 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAPH1Q70E73 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.79■□□□□ 0.12
RAPH1Q70E73 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RAPH1Q70E73 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAPH1Q70E73 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAPH1Q70E73 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RAPH1Q70E73 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAPH1Q70E73 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAPH1Q70E73 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RAPH1Q70E73 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAPH1Q70E73 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.79■□□□□ 0.12
RAPH1Q70E73 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAPH1Q70E73 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RAPH1Q70E73 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAPH1Q70E73 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
RAPH1Q70E73 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RAPH1Q70E73 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAPH1Q70E73 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAPH1Q70E73 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.79■□□□□ 0.12
RAPH1Q70E73 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.79■□□□□ 0.12
RAPH1Q70E73 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.79■□□□□ 0.12
RAPH1Q70E73 SPCS2P4-201ENST00000436160 681 ntBASIC15.79■□□□□ 0.12
RAPH1Q70E73 TIMM8BP1-201ENST00000452384 211 ntBASIC15.79■□□□□ 0.12
RAPH1Q70E73 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAPH1Q70E73 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.79■□□□□ 0.12
RAPH1Q70E73 AC243562.1-201ENST00000560672 389 ntBASIC15.79■□□□□ 0.12
RAPH1Q70E73 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.79■□□□□ 0.12
RAPH1Q70E73 AL121894.2-201ENST00000602977 491 ntBASIC15.79■□□□□ 0.12
RAPH1Q70E73 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAPH1Q70E73 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.79■□□□□ 0.12
RAPH1Q70E73 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.79■□□□□ 0.12
RAPH1Q70E73 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.79■□□□□ 0.12
RAPH1Q70E73 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAPH1Q70E73 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAPH1Q70E73 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAPH1Q70E73 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.79■□□□□ 0.12
RAPH1Q70E73 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAPH1Q70E73 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAPH1Q70E73 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAPH1Q70E73 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RAPH1Q70E73 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAPH1Q70E73 CYP4F24P-201ENST00000586049 1580 ntBASIC15.79■□□□□ 0.12
RAPH1Q70E73 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RAPH1Q70E73 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.78■□□□□ 0.12
RAPH1Q70E73 UXT-AS1-201ENST00000590504 1525 ntBASIC15.78■□□□□ 0.12
RAPH1Q70E73 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
RAPH1Q70E73 AC091951.1-201ENST00000512854 2465 ntBASIC15.78■□□□□ 0.12
RAPH1Q70E73 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAPH1Q70E73 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.78■□□□□ 0.12
RAPH1Q70E73 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.78■□□□□ 0.12
RAPH1Q70E73 KRT8P37-201ENST00000451609 1420 ntBASIC15.78■□□□□ 0.12
RAPH1Q70E73 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAPH1Q70E73 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAPH1Q70E73 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAPH1Q70E73 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAPH1Q70E73 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAPH1Q70E73 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAPH1Q70E73 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
RAPH1Q70E73 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAPH1Q70E73 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.78■□□□□ 0.12
RAPH1Q70E73 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.78■□□□□ 0.12
RAPH1Q70E73 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAPH1Q70E73 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.78■□□□□ 0.12
RAPH1Q70E73 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.78■□□□□ 0.12
RAPH1Q70E73 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms