Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 ADH5P3-201ENST00000433842 1137 ntBASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 PHKG1P2-201ENST00000457537 863 ntBASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 IGHV3-62-201ENST00000520057 340 ntBASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 AC243562.1-201ENST00000560672 389 ntBASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 AC026120.1-201ENST00000611536 926 ntBASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 AC126365.1-201ENST00000578585 1514 ntBASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 KRT8P44-201ENST00000441609 1350 ntBASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SMARCD3Q6STE5 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.33□□□□□ -0.11
SMARCD3Q6STE5 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SMARCD3Q6STE5 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
SMARCD3Q6STE5 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
SMARCD3Q6STE5 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.33□□□□□ -0.11
SMARCD3Q6STE5 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
SMARCD3Q6STE5 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.33□□□□□ -0.11
SMARCD3Q6STE5 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.33□□□□□ -0.12
SMARCD3Q6STE5 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.33□□□□□ -0.12
SMARCD3Q6STE5 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SMARCD3Q6STE5 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.33□□□□□ -0.12
SMARCD3Q6STE5 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
SMARCD3Q6STE5 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
SMARCD3Q6STE5 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMARCD3Q6STE5 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.33□□□□□ -0.12
SMARCD3Q6STE5 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMARCD3Q6STE5 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMARCD3Q6STE5 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMARCD3Q6STE5 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SMARCD3Q6STE5 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SMARCD3Q6STE5 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SMARCD3Q6STE5 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.33□□□□□ -0.12
SMARCD3Q6STE5 SPCS2P4-201ENST00000436160 681 ntBASIC14.33□□□□□ -0.12
SMARCD3Q6STE5 EEF1DP4-201ENST00000446006 880 ntBASIC14.33□□□□□ -0.12
SMARCD3Q6STE5 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
SMARCD3Q6STE5 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.33□□□□□ -0.12
SMARCD3Q6STE5 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.33□□□□□ -0.12
SMARCD3Q6STE5 KRT8P23-201ENST00000560090 1207 ntBASIC14.33□□□□□ -0.12
SMARCD3Q6STE5 AC120114.3-201ENST00000611923 658 ntBASIC14.33□□□□□ -0.12
SMARCD3Q6STE5 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.33□□□□□ -0.12
SMARCD3Q6STE5 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
SMARCD3Q6STE5 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
SMARCD3Q6STE5 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SMARCD3Q6STE5 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SMARCD3Q6STE5 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
SMARCD3Q6STE5 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMARCD3Q6STE5 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.33□□□□□ -0.12
SMARCD3Q6STE5 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMARCD3Q6STE5 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMARCD3Q6STE5 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMARCD3Q6STE5 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMARCD3Q6STE5 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SMARCD3Q6STE5 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SMARCD3Q6STE5 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.33□□□□□ -0.12
SMARCD3Q6STE5 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMARCD3Q6STE5 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMARCD3Q6STE5 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.33□□□□□ -0.12
SMARCD3Q6STE5 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMARCD3Q6STE5 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms