Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP4Q6PIL6 MIR4492-201ENST00000581627 80 ntBASIC12.2□□□□□ -0.46
KCNIP4Q6PIL6 AC090616.6-201ENST00000582640 721 ntBASIC12.2□□□□□ -0.46
KCNIP4Q6PIL6 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC12.2□□□□□ -0.46
KCNIP4Q6PIL6 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
KCNIP4Q6PIL6 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.2□□□□□ -0.46
KCNIP4Q6PIL6 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP4Q6PIL6 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
KCNIP4Q6PIL6 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP4Q6PIL6 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
KCNIP4Q6PIL6 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP4Q6PIL6 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.2□□□□□ -0.46
KCNIP4Q6PIL6 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP4Q6PIL6 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP4Q6PIL6 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP4Q6PIL6 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
KCNIP4Q6PIL6 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC12.2□□□□□ -0.46
KCNIP4Q6PIL6 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP4Q6PIL6 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP4Q6PIL6 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP4Q6PIL6 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP4Q6PIL6 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP4Q6PIL6 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
KCNIP4Q6PIL6 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
KCNIP4Q6PIL6 AC125634.1-201ENST00000438758 1403 ntBASIC12.2□□□□□ -0.46
KCNIP4Q6PIL6 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP4Q6PIL6 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP4Q6PIL6 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.2□□□□□ -0.46
KCNIP4Q6PIL6 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 SIGLEC30P-201ENST00000455569 941 ntBASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 AC087388.1-201ENST00000571370 1112 ntBASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 AL390719.2-201ENST00000606993 987 ntBASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP4Q6PIL6 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 UBC-206ENST00000538617 1303 ntTSL 5 BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms