Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 RPL5P21-201ENST00000404620 815 ntBASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 UNC93B7-201ENST00000509439 705 ntBASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 AL138918.1-201ENST00000568306 659 ntBASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 PRKN-208ENST00000610470 531 ntTSL 2 BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 PRKN-209ENST00000612485 225 ntTSL 5 BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 AC012313.10-201ENST00000623509 926 ntBASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 VPS51-217ENST00000639871 243 ntTSL 5 BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
LINC00242Q5T6M2 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
LINC00242Q5T6M2 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00242Q5T6M2 INTS4P1-203ENST00000641008 3683 ntBASIC10.72□□□□□ -0.69
LINC00242Q5T6M2 AC067750.1-201ENST00000608826 6545 ntBASIC10.72□□□□□ -0.69
LINC00242Q5T6M2 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00242Q5T6M2 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00242Q5T6M2 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00242Q5T6M2 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00242Q5T6M2 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC10.72□□□□□ -0.69
LINC00242Q5T6M2 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC10.72□□□□□ -0.69
LINC00242Q5T6M2 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC10.72□□□□□ -0.69
LINC00242Q5T6M2 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC10.72□□□□□ -0.69
LINC00242Q5T6M2 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00242Q5T6M2 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00242Q5T6M2 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC10.72□□□□□ -0.69
LINC00242Q5T6M2 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00242Q5T6M2 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00242Q5T6M2 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00242Q5T6M2 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00242Q5T6M2 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00242Q5T6M2 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
LINC00242Q5T6M2 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00242Q5T6M2 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00242Q5T6M2 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC10.72□□□□□ -0.69
LINC00242Q5T6M2 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC10.72□□□□□ -0.69
LINC00242Q5T6M2 EMBP1-201ENST00000458200 901 ntBASIC10.72□□□□□ -0.69
LINC00242Q5T6M2 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00242Q5T6M2 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC10.72□□□□□ -0.69
LINC00242Q5T6M2 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00242Q5T6M2 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
LINC00242Q5T6M2 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
LINC00242Q5T6M2 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC10.72□□□□□ -0.69
LINC00242Q5T6M2 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
LINC00242Q5T6M2 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC10.72□□□□□ -0.69
LINC00242Q5T6M2 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC10.72□□□□□ -0.69
LINC00242Q5T6M2 COQ9-214ENST00000567933 882 ntTSL 3 BASIC10.72□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms